PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CCG022183.1
Organism
Populus euphratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
Family BES1
Protein Properties Length: 283aa    MW: 30576.3 Da    PI: 9.8744
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CCG022183.1genomeLZUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822223.54.3e-6951481148
       DUF822   1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspesslqssl 98 
                  g+sgr ptwkErEnnkrRERrRRaiaakiy+GLR qGnyklpk++DnneVlkALc+eAGw+ve+DGttyrkg+kp+  +e+ag+ +++s +ss+q s+
  CCG022183.1   5 GSSGRLPTWKERENNKRRERRRRAIAAKIYTGLRTQGNYKLPKHCDNNEVLKALCAEAGWIVEEDGTTYRKGCKPP-PTEIAGTPTNISACSSIQPSP 101
                  689*************************************************************************.9******************** PP

       DUF822  99 kssalaspvesysaspksssfpspssldsislasaasllpvlsvlslvss 148
                  +ss+++spv+sy+asp+sssfpsps++d +++   + llp+l++ ++++ 
  CCG022183.1 102 QSSNFPSPVASYHASPTSSSFPSPSRFDGNPS---TYLLPFLRNIASIPT 148
                  ******************************88...599999999887654 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056871.2E-646130IPR008540BES1/BZR1 plant transcription factor, N-terminal
Sequence ? help Back to Top
Protein Sequence    Length: 283 aa     Download sequence    Send to blast
MTAGGSSGRL PTWKERENNK RRERRRRAIA AKIYTGLRTQ GNYKLPKHCD NNEVLKALCA  60
EAGWIVEEDG TTYRKGCKPP PTEIAGTPTN ISACSSIQPS PQSSNFPSPV ASYHASPTSS  120
SFPSPSRFDG NPSTYLLPFL RNIASIPTNL PPLRISNSAP VTPPRSSPTC RSSKRKVDWE  180
SLSNGTLNSL HHPLLAASAP SMAPHVAPPS PTFNLVKPAA QQSGFQDGVD RHGGLSWGAT  240
AERGRGAEFE FENCRVKPWE GERIHEIGVD DLELTLGGGK ARG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zd4_A8e-31987372450Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B8e-31987372450Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C8e-31987372450Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D8e-31987372450Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEF1442160.0EF144216.1 Populus trichocarpa clone PX0011_E05 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011025717.11e-166PREDICTED: LOW QUALITY PROTEIN: BES1/BZR1 homolog protein 2
SwissprotQ94A436e-99BEH2_ARATH; BES1/BZR1 homolog protein 2
TrEMBLA9P7X71e-159A9P7X7_POPTR; Uncharacterized protein
STRINGPOPTR_0007s12370.11e-160(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF127534105
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75080.29e-58BES1 family protein