PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | CCG020388.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
|
||||||||
Family | bZIP | ||||||||
Protein Properties | Length: 269aa MW: 30457.3 Da PI: 10.2296 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 38.8 | 2e-12 | 199 | 243 | 5 | 49 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkel 49 ++ +rk+kNRe+A rsR+RK+a+ eL k+ L +eN +Lkke CCG020388.1 199 RKLKRKIKNRESAARSRARKQAYHNELVSKISHLGEENIKLKKEK 243 45799*************************************985 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 1.1E-8 | 195 | 267 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.025 | 197 | 242 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14707 | 1.61E-13 | 199 | 236 | No hit | No description |
SuperFamily | SSF57959 | 6.88E-10 | 199 | 245 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 5.4E-11 | 199 | 243 | No hit | No description |
Pfam | PF00170 | 2.7E-10 | 199 | 244 | IPR004827 | Basic-leucine zipper domain |
PROSITE pattern | PS00036 | 0 | 202 | 217 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 269 aa Download sequence Send to blast |
MGVQTMASQR NSQQSHLQPY QLTRQNSWYN LTLNEVENQL GNLGKPLCSM NLDELLKNVW 60 STEANQSVGM DSESTSISSF QHQASLTLAR ALSGKTVDQV WKEIQQGQKK RFGEEMKVQE 120 RVQTLGEMTL EDFLVQAGLF AKATISPSLD LATVDAVTPQ SFSQKMVRSS SPSTGTLSDT 180 TTSGRKRYTP DAFEKSIERK LKRKIKNRES AARSRARKQA YHNELVSKIS HLGEENIKLK 240 KEKEFEKKFP IEPSAEQKYQ LRRTSSTSF |
Functional Description ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Description | |||||
UniProt | Binds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development. |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_011003854.1 | 0.0 | PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X3 | ||||
Swissprot | Q9LES3 | 1e-63 | AI5L2_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 2 | ||||
TrEMBL | A0A3N7FHC4 | 1e-174 | A0A3N7FHC4_POPTR; Uncharacterized protein | ||||
STRING | POPTR_0009s02360.1 | 1e-167 | (Populus trichocarpa) |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF12464 | 25 | 32 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G56850.1 | 3e-48 | ABA-responsive element binding protein 3 |
Publications ? help Back to Top | |||
---|---|---|---|
|