PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CCG019117.2
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
Family ARR-B
Protein Properties Length: 458aa    MW: 51343.7 Da    PI: 6.3666
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CCG019117.2genomeLZUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like68.61e-21209262155
      G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                  kp l+Wt+eLH+rF++a++ L G +   Pk+il++m+v gL  e+v SHLQkYRl
  CCG019117.2 209 KPGLVWTNELHNRFLQAIRIL-GVDGVHPKKILQHMNVSGLKKENVSSHLQKYRL 262
                  57799****************.9*******************************8 PP

2Response_reg57.86.3e-20251321107
                   EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH..HHHHESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTES CS
  Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealell..kekdpDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGak 95 
                   +l+v+ +p+ ++++ ++l+  gy ev++a+++++al++l  ke +++lil+   +++md +e++++ r+ +++lpi+v++a ++ + +l  l  Ga 
   CCG019117.2  25 ILVVESDPTCLRIVSKMLQAFGY-EVTTATQATDALHILweKEDEINLILIETHLSDMDQYEIIETVRAMSSSLPIVVFSADNNVSAMLGWLYKGAA 120
                   89*********************.*************99644444**************************************************** PP

                   EEEESS--HHHH CS
  Response_reg  96 dflsKpfdpeel 107
                    +l+Kp+ ++++
   CCG019117.2 121 LYLMKPIVKNDV 132
                   ******987765 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF521725.69E-2321142IPR011006CheY-like superfamily
Gene3DG3DSA:3.40.50.23001.6E-2521170No hitNo description
SMARTSM004482.0E-1123136IPR001789Signal transduction response regulator, receiver domain
PROSITE profilePS5011028.95324140IPR001789Signal transduction response regulator, receiver domain
PfamPF000726.1E-1525133IPR001789Signal transduction response regulator, receiver domain
CDDcd001568.55E-1726127No hitNo description
SuperFamilySSF466891.08E-16207265IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.602.4E-22208263IPR009057Homeodomain-like
TIGRFAMsTIGR015573.6E-20209262IPR006447Myb domain, plants
PfamPF002491.5E-6213261IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000160Biological Processphosphorelay signal transduction system
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 458 aa     Download sequence    Send to blast
MTSEQFLSFE VTKNKASSFA KGVRILVVES DPTCLRIVSK MLQAFGYEVT TATQATDALH  60
ILWEKEDEIN LILIETHLSD MDQYEIIETV RAMSSSLPIV VFSADNNVSA MLGWLYKGAA  120
LYLMKPIVKN DVKNLWQLTY RKKKKTTVSS VGSNSFHAGL AEENASSVTA GIPSLLSTTG  180
KIDQMGKTKE LEEIDSDDED NDNLTVLKKP GLVWTNELHN RFLQAIRILG VDGVHPKKIL  240
QHMNVSGLKK ENVSSHLQKY RLSWKWEQDA TQKTMIRDHH PSLTLNLQGE FSQFTNPQFS  300
MAISQSEHRN NIQNNLCSPV SMHSRGSAHS LTRVNTNSDG MLIPSYGQQS KQLDHTYPNC  360
SHTGIGTNND GNLASLGQKR NHNVEEHLNQ GTTFSNVGTH GPTFLGNSQQ QLQFPLLQPQ  420
PLPEKEDESD IPNNITEARN EFLVTKNEFL DNPNNDLW
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1irz_A4e-15205265161ARR10-B
Search in ModeBase
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC1834260.0AC183426.2 Populus trichocarpa clone Pop1-45L17, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011023448.10.0PREDICTED: two-component response regulator ARR14-like
RefseqXP_011023449.10.0PREDICTED: two-component response regulator ARR14-like
TrEMBLA0A3Q9EE420.0A0A3Q9EE42_POPTO; Response regulator 2,ARR-B
STRINGPOPTR_0002s15430.10.0(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF145541114
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16110.14e-42response regulator 2