PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | CCG019102.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 821aa MW: 89680.8 Da PI: 6.4687 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 65.4 | 7.9e-21 | 117 | 172 | 1 | 56 |
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 +++ +++t++q++eLe+lF+++++p++++r eL+++l L++rqVk+WFqNrR+++k CCG019102.1 117 KKRYHRHTPQQIQELEALFKECPHPDEKQRLELSRRLCLETRQVKFWFQNRRTQMK 172 688999***********************************************999 PP | |||||||
2 | START | 199 | 2.1e-62 | 327 | 552 | 1 | 206 |
HHHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEEEEE CS START 1 elaeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaetlevi 85 ela++a++elvk+++ +ep+W s e++n +e+l++f++ + + +ea+r++g+v+ ++ lve+l+d++ +W e+++ + +t++vi CCG019102.1 327 ELALAAMDELVKMVQTDEPLWIGSFeggrEILNHEEYLRTFTPCIGmkpsgFVSEASRETGMVIINSLALVETLMDSN-RWAEMFPcmiaRTSTTDVI 423 5899******************9999****************999899******************************.******************* PP CTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--..-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SS CS START 86 ssg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe.sssvvRaellpSgiliepksnghskvtwvehvdlkgr 175 sg g lqlm aelq+lsplvp R++ f+R+++q+ +g+w++vdvS+d ++ + + +v +++lpSg+++++++ng+skvtwveh+++++r CCG019102.1 424 ASGmggtrnGSLQLMHAELQVLSPLVPvREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGaPPTYVNCRRLPSGFVVQDMPNGYSKVTWVEHAEYDER 521 ******************************************************999999999*********************************** PP XXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS START 176 lphwllrslvksglaegaktwvatlqrqcek 206 + h+l+r++++sg+ +ga++w atlqrqce+ CCG019102.1 522 QLHQLYRPVISSGMGFGAQRWIATLQRQCEC 552 *****************************96 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF46689 | 1.2E-20 | 100 | 174 | IPR009057 | Homeodomain-like |
Gene3D | G3DSA:1.10.10.60 | 1.1E-21 | 104 | 174 | IPR009057 | Homeodomain-like |
PROSITE profile | PS50071 | 17.216 | 114 | 174 | IPR001356 | Homeobox domain |
SMART | SM00389 | 1.7E-17 | 115 | 178 | IPR001356 | Homeobox domain |
CDD | cd00086 | 2.03E-18 | 116 | 174 | No hit | No description |
Pfam | PF00046 | 2.2E-18 | 117 | 172 | IPR001356 | Homeobox domain |
PROSITE pattern | PS00027 | 0 | 149 | 172 | IPR017970 | Homeobox, conserved site |
PROSITE profile | PS50848 | 44.353 | 318 | 555 | IPR002913 | START domain |
SuperFamily | SSF55961 | 2.2E-33 | 320 | 552 | No hit | No description |
CDD | cd08875 | 2.02E-122 | 322 | 551 | No hit | No description |
Pfam | PF01852 | 2.9E-54 | 327 | 552 | IPR002913 | START domain |
SMART | SM00234 | 1.3E-46 | 327 | 552 | IPR002913 | START domain |
SuperFamily | SSF55961 | 1.65E-22 | 580 | 814 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0009827 | Biological Process | plant-type cell wall modification | ||||
GO:0042335 | Biological Process | cuticle development | ||||
GO:0043481 | Biological Process | anthocyanin accumulation in tissues in response to UV light | ||||
GO:0048765 | Biological Process | root hair cell differentiation | ||||
GO:0008289 | Molecular Function | lipid binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 821 aa Download sequence Send to blast |
MSFGGFLENT SPGGGGARIV ADIPYNNNKN MPPGAMAQTR LVSPSLTKSV FNSPGLSLAL 60 QQPNIDGQGD ITRLAENFET SVGRRSREEE HESRSGSDNM DGASGDDQDA ADKPPRKKRY 120 HRHTPQQIQE LEALFKECPH PDEKQRLELS RRLCLETRQV KFWFQNRRTQ MKTQLERHEN 180 SLLRQDNDKL RAENMSIRDA MRNPSCSNCG GPAIIGDISL EEQHLRIENA RLKDELDRVC 240 ALAGKFLGRP ISSLASSHGP PMPNSSLELA VGSNGFAGLS TMATTLPLGP HFEGGISGAL 300 PMVTQTRLAT AGVTGIDRSL ERSMFLELAL AAMDELVKMV QTDEPLWIGS FEGGREILNH 360 EEYLRTFTPC IGMKPSGFVS EASRETGMVI INSLALVETL MDSNRWAEMF PCMIARTSTT 420 DVIASGMGGT RNGSLQLMHA ELQVLSPLVP VREVNFLRFC KQHAEGVWAV VDVSIDTIRE 480 TSGAPPTYVN CRRLPSGFVV QDMPNGYSKV TWVEHAEYDE RQLHQLYRPV ISSGMGFGAQ 540 RWIATLQRQC ECLAILLSSN VPSRDHTAIT TSGRRSMLKL AQRMTDNFCA GVCASTVHKW 600 NKLNAGNVDE DVRVMTRKRV NDPGEPPGIV LSAATSVWLP VSPQRLFDFL RNERLRSEWD 660 ILSNGGPMQE MAHIAKGQDH GNCVSLLRAS AMNANQSSML ILQETCMDAA GSLVVYAPVD 720 TPAMHVVMNG GDSAYVALLP SGFAIVPDGP GSSDHQTTNG GPNANNVGGQ ERVSGSLLTV 780 AFQILVNSLP TAKLTVESVE TVNNLISCTV QKIKAALQCE S |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor involved in the regulation of the tissue-specific accumulation of anthocyanins and in cellular organization of the primary root. {ECO:0000269|PubMed:10402424}. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00421 | DAP | Transfer from AT4G00730 | Download |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011023404.1 | 0.0 | PREDICTED: homeobox-leucine zipper protein ANTHOCYANINLESS 2-like isoform X1 | ||||
Swissprot | Q0WV12 | 0.0 | ANL2_ARATH; Homeobox-leucine zipper protein ANTHOCYANINLESS 2 | ||||
TrEMBL | A0A385JHT9 | 0.0 | A0A385JHT9_POPTO; Homeodomain protein | ||||
TrEMBL | B9GPV9 | 0.0 | B9GPV9_POPTR; Uncharacterized protein | ||||
STRING | POPTR_0002s15610.1 | 0.0 | (Populus trichocarpa) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF1192 | 34 | 106 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G00730.1 | 0.0 | HD-ZIP family protein |
Publications ? help Back to Top | |||
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