PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CCG019069.1
Organism
Populus euphratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
Family BES1
Protein Properties Length: 728aa    MW: 81418.8 Da    PI: 5.9143
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CCG019069.1genomeLZUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822146.52.3e-45752141133
       DUF822   1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyr...kgskpl.eeaeaagssas..aspes 92 
                  gg++r+++ +E+E++k+RER+RRai+a+i+aGLR++Gny+l++raD+n+V++AL+reAGwvv +DGtt++   +gs+p   +++a+ ss+s  +s+++
  CCG019069.1  75 GGARRSRPLEEKERTKLRERHRRAITARILAGLRRHGNYNLRVRADINDVIAALAREAGWVVLPDGTTFPsrsQGSRPAgGTSAAVTSSSShlVSQQT 172
                  6899*****************************************************************98889999997333333333333488888 PP

       DUF822  93 slq.sslkssalaspvesysaspksssfpspssldsislasa 133
                  +   ++ +s   ++ ve   +++k + +p ps +d   ++++
  CCG019069.1 173 PPAsLRGVSPGYQTSVEYNTCRMKGVFMPNPSPYDLSASTQP 214
                  888789999*************************98877644 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056871.1E-3877210IPR008540BES1/BZR1 plant transcription factor, N-terminal
SuperFamilySSF514456.59E-183262705IPR017853Glycoside hydrolase superfamily
Gene3DG3DSA:3.20.20.801.3E-200263705IPR013781Glycoside hydrolase, catalytic domain
PfamPF013734.5E-107268686IPR001554Glycoside hydrolase, family 14
PRINTSPR007501.1E-73299313IPR001554Glycoside hydrolase, family 14
PRINTSPR007501.1E-73320338IPR001554Glycoside hydrolase, family 14
PRINTSPR007501.1E-73342363IPR001554Glycoside hydrolase, family 14
PROSITE patternPS005060346354IPR018238Glycoside hydrolase, family 14, conserved site
PRINTSPR008421.8E-6425434IPR001371Glycoside hydrolase, family 14B, plant
PRINTSPR007501.1E-73435457IPR001554Glycoside hydrolase, family 14
PRINTSPR007501.1E-73508527IPR001554Glycoside hydrolase, family 14
PRINTSPR007501.1E-73542558IPR001554Glycoside hydrolase, family 14
PRINTSPR007501.1E-73559570IPR001554Glycoside hydrolase, family 14
PRINTSPR007501.1E-73577600IPR001554Glycoside hydrolase, family 14
PRINTSPR008421.8E-6580590IPR001371Glycoside hydrolase, family 14B, plant
PRINTSPR007501.1E-73617639IPR001554Glycoside hydrolase, family 14
PRINTSPR008421.8E-6668682IPR001371Glycoside hydrolase, family 14B, plant
PRINTSPR008421.8E-6683697IPR001371Glycoside hydrolase, family 14B, plant
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000272Biological Processpolysaccharide catabolic process
GO:0048831Biological Processregulation of shoot system development
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0016161Molecular Functionbeta-amylase activity
Sequence ? help Back to Top
Protein Sequence    Length: 728 aa     Download sequence    Send to blast
MATDIQKLMG TSEEDDDEEM DMDVKEEDDE DEENGGKNIA AQIIAGGGGG MASNNSDNQF  60
QHQQQFQEQV TTPAGGARRS RPLEEKERTK LRERHRRAIT ARILAGLRRH GNYNLRVRAD  120
INDVIAALAR EAGWVVLPDG TTFPSRSQGS RPAGGTSAAV TSSSSHLVSQ QTPPASLRGV  180
SPGYQTSVEY NTCRMKGVFM PNPSPYDLSA STQPQIPAVV GEGGEQTESS LHIGGSMDII  240
NDKQIIDIPP IPKLPERDFA GTSFIPVYVM LPLGVINMKC ELVDPDDLLK QLKVLKSANV  300
DGIMVDCWWG IVEAHTPQEY NWSGYGRLFQ MVRELKLKLQ VVMSFHECGG NVGDDVCIPL  360
PHWVAEIGRS NPDIFFTDRE GRRNPECLSW GIDKERVLRG RTAVEVYFDY MRSFRAEFDE  420
FFADGIISMV EVGLGPCGEL RYPSCPVKHG WRYPGIGEFQ CYDQYLLKSL KKTAEARRHP  480
FWARGPDNAG FYNSQPHETG FFCDGGDYDG YYGRFFLNWY TRILVDHGDR VLSLAKLAFE  540
GTQIAVKLSG IHWWYKTASH AAELTAGFYN PCNRDGYAAI SAMLKKHKAA LNFSCSELRM  600
VDQQVDFAEA LADPEGLVWQ VLNAAWEVGI PIASENALPC HDRVTYNKIL DKAKPSNDPD  660
GRHFLSFTHL RLSPLLMERQ TFMEFERFVK RMHGSGCFNA CQNPRNNKFG ATSMSFTDLG  720
NLHQFSVS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ukp_A1e-15626371510462Beta-amylase
1ukp_B1e-15626371510462Beta-amylase
1ukp_C1e-15626371510462Beta-amylase
1ukp_D1e-15626371510462Beta-amylase
1wdr_A1e-15626371410461Beta-amylase
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011023344.10.0PREDICTED: beta-amylase 7 isoform X2
SwissprotO808310.0BAM7_ARATH; Beta-amylase 7
TrEMBLA0A3N7ENL00.0A0A3N7ENL0_POPTR; Beta-amylase
STRINGPOPTR_0002s16070.10.0(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF108833339
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45880.10.0beta-amylase 7
Publications ? help Back to Top
  1. Soyk S, et al.
    The Enzyme-Like Domain of Arabidopsis Nuclear β-Amylases Is Critical for DNA Sequence Recognition and Transcriptional Activation.
    Plant Cell, 2014. 26(4): p. 1746-1763
    [PMID:24748042]