PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

CCG016772.1

Organism

Populus euphratica

Taxonomic ID

75702

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus

Family

VOZ

Protein Properties

Length: 489aa MW: 54831.5 Da PI: 5.9325

Description

VOZ family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
CCG016772.1	genome	LZU	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	VOZ	426.5	4.2e-131	207	424	1	217
VOZ 1 pppsaflgpkcalwdctrpaqg.sewlqdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspwnaaelfd 97 pppsaflgpkcalwdc+rpaqg +w+qdycssfh ++a+neg+pg++p+lrp+gi+lkd llf++l+akv+gk+vgipecegaatakspwna+elfd CCG016772.1 207 PPPSAFLGPKCALWDCPRPAQGgLDWYQDYCSSFHHDVAVNEGPPGLSPILRPGGIGLKDCLLFSSLRAKVEGKDVGIPECEGAATAKSPWNAPELFD 304 89****************9648********************************************************************** PP VOZ 98 lsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldalalyrlelklvdekks 195 ls+l+getirewlffdkprrafesgnrkqrslpdy+grgwhesrkqvm+e+gglkrsyymdpqp+++fewhlyeyein++da+alyrlelk vd+kks CCG016772.1 305 LSVLKGETIREWLFFDKPRRAFESGNRKQRSLPDYTGRGWHESRKQVMNEYGGLKRSYYMDPQPLNNFEWHLYEYEINNCDACALYRLELKAVDGKKS 402 ********************************************************************************************** PP VOZ 196 akgkvskdsladlqkklgrlta 217 akgk++++s++dlqk++grlta CCG016772.1 403 AKGKLANESVVDLQKQMGRLTA 424 ******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 489 aa Download sequence Send to blast
MGKGSKINCK SASHKLFKDK AKNRVDDLQG MFLDLQFARK ESRTVDVAVL EEQVHQMLRE 60 WKAELNEPSP ASSLQQGGSL GSFSTDICRL LQLCEEEDDA TSALAAPKPE PNDQSLQVGN 120 NVIFQEGYGV NHDQQEHVFP FVDECKDSPS GVRSMVINNM EGLAQLEYHH FDLPQNSEQN 180 FYTGFNGMDL SEDATHLVSS YLPSMCPPPS AFLGPKCALW DCPRPAQGGL DWYQDYCSSF 240 HHDVAVNEGP PGLSPILRPG GIGLKDCLLF SSLRAKVEGK DVGIPECEGA ATAKSPWNAP 300 ELFDLSVLKG ETIREWLFFD KPRRAFESGN RKQRSLPDYT GRGWHESRKQ VMNEYGGLKR 360 SYYMDPQPLN NFEWHLYEYE INNCDACALY RLELKAVDGK KSAKGKLANE SVVDLQKQMG 420 RLTAEFPSDH KRTVKGRTKV NAKAGVRNVY SGSTRVAPTN EAYDYGPGPH YDYLVENLGD 480 YYLTQFKKP

Sequence ? help Back to Top

Protein Sequence Length: 489 aa Download sequence Send to blast

MGKGSKINCK SASHKLFKDK AKNRVDDLQG MFLDLQFARK ESRTVDVAVL EEQVHQMLRE  60
WKAELNEPSP ASSLQQGGSL GSFSTDICRL LQLCEEEDDA TSALAAPKPE PNDQSLQVGN  120
NVIFQEGYGV NHDQQEHVFP FVDECKDSPS GVRSMVINNM EGLAQLEYHH FDLPQNSEQN  180
FYTGFNGMDL SEDATHLVSS YLPSMCPPPS AFLGPKCALW DCPRPAQGGL DWYQDYCSSF  240
HHDVAVNEGP PGLSPILRPG GIGLKDCLLF SSLRAKVEGK DVGIPECEGA ATAKSPWNAP  300
ELFDLSVLKG ETIREWLFFD KPRRAFESGN RKQRSLPDYT GRGWHESRKQ VMNEYGGLKR  360
SYYMDPQPLN NFEWHLYEYE INNCDACALY RLELKAVDGK KSAKGKLANE SVVDLQKQMG  420
RLTAEFPSDH KRTVKGRTKV NAKAGVRNVY SGSTRVAPTN EAYDYGPGPH YDYLVENLGD  480
YYLTQFKKP

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269\|PubMed:15295067, ECO:0000269\|PubMed:22904146}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: By far-red light. {ECO:0000269\|PubMed:22904146}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011001207.1	0.0	PREDICTED: transcription factor VOZ1-like isoform X1
Refseq	XP_011001208.1	0.0	PREDICTED: transcription factor VOZ1-like isoform X1
Swissprot	Q9SGQ0	0.0	VOZ1_ARATH; Transcription factor VOZ1
TrEMBL	B9N9L2	0.0	B9N9L2_POPTR; Uncharacterized protein
STRING	POPTR_0011s05890.1	0.0	(Populus trichocarpa)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF1498	34	94

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28520.2	0.0	vascular plant one zinc finger protein

Publications ? help Back to Top
Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] Yasui Y,Kohchi T VASCULAR PLANT ONE-ZINC FINGER1 and VOZ2 repress the FLOWERING LOCUS C clade members to control flowering time in Arabidopsis. Biosci. Biotechnol. Biochem., 2014. 78(11): p. 1850-5 [PMID:25351333] Kumar S,Choudhary P,Gupta M,Nath U VASCULAR PLANT ONE-ZINC FINGER1 (VOZ1) and VOZ2 Interact with CONSTANS and Promote Photoperiodic Flowering Transition. Plant Physiol., 2018. 176(4): p. 2917-2930 [PMID:29507119] Song C,Lee J,Kim T,Hong JC,Lim CO VOZ1, a transcriptional repressor of DREB2C, mediates heat stress responses in Arabidopsis. Planta, 2018. 247(6): p. 1439-1448 [PMID:29536220]