PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CCG014576.1
Organism
Populus euphratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
Family AP2
Protein Properties Length: 807aa    MW: 89586 Da    PI: 6.2327
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CCG014576.1genomeLZUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP233.11.4e-10451507155
          AP2   1 sgykGVrwdkkrgrWvAeIrd.pseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                  s y+GV++++++gr++A+++d  s+n  ++k+   g ++ +e Aa  ++ a++k++g
  CCG014576.1 451 SIYRGVTRHRWTGRFEAHLWDkSSWNSiQNKKGKQGAYDNEEAAAHTYDLAALKYWG 507
                  57*******************77779998855555********************98 PP
2AP251.13.3e-16550602156
          AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                  s+y+GV +++ +grW+A+I  ++    +k+ +lg++ t eeAa+a++ a+ +++g+
  CCG014576.1 550 SKYRGVARHHHNGRWEARIGRVYG---NKYLYLGTYNTQEEAAAAYDMAAIQYRGA 602
                  89****99***********99654...4*************************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008471.2E-7451507IPR001471AP2/ERF domain
SuperFamilySSF541711.57E-13451517IPR016177DNA-binding domain
CDDcd000182.99E-16451516No hitNo description
SMARTSM003801.8E-17452521IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.4E-11452515IPR001471AP2/ERF domain
PROSITE profilePS5103217.925452515IPR001471AP2/ERF domain
PRINTSPR003676.0E-6453464IPR001471AP2/ERF domain
PfamPF008473.3E-11550601IPR001471AP2/ERF domain
CDDcd000185.45E-15550611No hitNo description
SuperFamilySSF541711.57E-17550611IPR016177DNA-binding domain
PROSITE profilePS5103218.215551609IPR001471AP2/ERF domain
SMARTSM003802.6E-25551615IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.106.3E-18551610IPR001471AP2/ERF domain
PRINTSPR003676.0E-6591611IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006110Biological Processregulation of glycolytic process
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009744Biological Processresponse to sucrose
GO:0019432Biological Processtriglyceride biosynthetic process
GO:1901959Biological Processpositive regulation of cutin biosynthetic process
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 807 aa     Download sequence    Send to blast
MAMAAFKSTS RRAQTTSAAT SDKETSAKQH ALPRKTVSSR RSRSVSAVSR SHLVDTCSTT  60
RTATGSTDFL NKRDNPLYWS NVSPPGKEVS EVVADKEESK SAPTKPNAVG DRREGVMIPS  120
LPFRSWEDGG LGSSFSEAEG RTIKAVCEQM QSFQGDDLGD DTSSRIYETV RSEVRRAIAD  180
IQNDLESTIR RSNTTTIAMS NVTDIPPDLV NPSAVELVLD IRREYANKLE QSHERARKLR  240
ADLAVEEHRG SELSRILKEV LPHPKTSNVQ KPRAARKSSI ERRKVSKRLT DEAMAYFDEC  300
VSLSTFDSSD FSSPEDPPIN FVGVASPVGD CASFSQASSN AAANCYPNSF TTNKQELVSA  360
HSHSASVLSA TGSSKEPTLD EVILNRSETP YGQRFQFSFA CKRNDSIEVQ QDIRNIQKPK  420
PKRIRKNQKS NQGKSQNAAA NNSHNSGKRS SIYRGVTRHR WTGRFEAHLW DKSSWNSIQN  480
KKGKQGAYDN EEAAAHTYDL AALKYWGSET TLNFPIETYT KEIEEMQKVT KEEYLASLRR  540
QSSGFSRGVS KYRGVARHHH NGRWEARIGR VYGNKYLYLG TYNTQEEAAA AYDMAAIQYR  600
GANAVTNFDV SNYIERLRKK GIPIDRILQE QQLLNNSIDS SVEVEVEVEQ PTPPPQQQEE  660
QEQKIVSSSS QLQCSQLNSS LAGTPPMVIM DTIEEHELAW SFCMDSGLSL TMPDLPLEKS  720
CELPDLFDHT GFEDNIDLIF DACCYGNEAN PAGYILEDNS TGGVEEVGVT RSIDEESESG  780
KDRLLSDSVS NSPTSSTTTS VSCNYSV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54320.31e-107AP2 family protein