PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

CCG012885.1

Organism

Populus euphratica

Taxonomic ID

75702

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus

Family

VOZ

Protein Properties

Length: 449aa MW: 49977.1 Da PI: 5.3516

Description

VOZ family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
CCG012885.1	genome	LZU	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	VOZ	452.5	4.5e-139	210	426	1	217
VOZ 1 pppsaflgpkcalwdctrpaqgsewlqdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspwnaaelfdl 98 pppsaf+gpkcalwdctrpaqgsew++dycssfhatlalneg+pg+tpvlrp+gi+lkd+llf+al ak+qgk+vgip+cegaa +kspwnaaelfdl CCG012885.1 210 PPPSAFMGPKCALWDCTRPAQGSEWCKDYCSSFHATLALNEGPPGMTPVLRPRGINLKDNLLFDALAAKMQGKNVGIPQCEGAAVMKSPWNAAELFDL 307 89********************************************************************************************** PP VOZ 99 sllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldalalyrlelklvdekksa 196 sllegetirewlffdkprraf+sgnrkqrslpdysgrgwhesrkqvmke+gg+k+syymdpqp++++ewhlyeyein++da+alyrle+kl+d+kk++ CCG012885.1 308 SLLEGETIREWLFFDKPRRAFDSGNRKQRSLPDYSGRGWHESRKQVMKELGGKKKSYYMDPQPPGCHEWHLYEYEINNCDACALYRLEFKLADGKKTP 405 ********************************************************************************************** PP VOZ 197 kgkvskdsladlqkklgrlta 217 kgkvskdsladlqkk+grlta CCG012885.1 406 KGKVSKDSLADLQKKMGRLTA 426 *****************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 449 aa Download sequence Send to blast
MQKGGKSKCA STSHHLLMDN AKNRLNDLEE RFFNIQAARK EGRNNDVALL EEQVCQSLRE 60 WKAELDVPSP ANSLLDISLG SFSEDIGRLL QLYEEEDDAI SPLTMQSVLK PETQPEPNFQ 120 NLNLGNLTTF QDEYLVNSHS QELGFQGFHQ PNGPSGLQNV AVSDPDITTL LDCHQFTLDE 180 EFDPGHFVGT NDTKECGINA ESNNLQYISP PPSAFMGPKC ALWDCTRPAQ GSEWCKDYCS 240 SFHATLALNE GPPGMTPVLR PRGINLKDNL LFDALAAKMQ GKNVGIPQCE GAAVMKSPWN 300 AAELFDLSLL EGETIREWLF FDKPRRAFDS GNRKQRSLPD YSGRGWHESR KQVMKELGGK 360 KKSYYMDPQP PGCHEWHLYE YEINNCDACA LYRLEFKLAD GKKTPKGKVS KDSLADLQKK 420 MGRLTAVVTA DNSPSDKGKT NTSGTGHGP

Sequence ? help Back to Top

Protein Sequence Length: 449 aa Download sequence Send to blast

MQKGGKSKCA STSHHLLMDN AKNRLNDLEE RFFNIQAARK EGRNNDVALL EEQVCQSLRE  60
WKAELDVPSP ANSLLDISLG SFSEDIGRLL QLYEEEDDAI SPLTMQSVLK PETQPEPNFQ  120
NLNLGNLTTF QDEYLVNSHS QELGFQGFHQ PNGPSGLQNV AVSDPDITTL LDCHQFTLDE  180
EFDPGHFVGT NDTKECGINA ESNNLQYISP PPSAFMGPKC ALWDCTRPAQ GSEWCKDYCS  240
SFHATLALNE GPPGMTPVLR PRGINLKDNL LFDALAAKMQ GKNVGIPQCE GAAVMKSPWN  300
AAELFDLSLL EGETIREWLF FDKPRRAFDS GNRKQRSLPD YSGRGWHESR KQVMKELGGK  360
KKSYYMDPQP PGCHEWHLYE YEINNCDACA LYRLEFKLAD GKKTPKGKVS KDSLADLQKK  420
MGRLTAVVTA DNSPSDKGKT NTSGTGHGP

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269\|PubMed:15295067, ECO:0000269\|PubMed:22904146}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: By far-red light. {ECO:0000269\|PubMed:22904146}.

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	AC213156	1e-171	AC213156.1 Populus trichocarpa clone POP076-I18, complete sequence.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011002664.1	0.0	PREDICTED: transcription factor VOZ1-like
Refseq	XP_011002665.1	0.0	PREDICTED: transcription factor VOZ1-like
Swissprot	Q9SGQ0	1e-173	VOZ1_ARATH; Transcription factor VOZ1
TrEMBL	B9IQS1	0.0	B9IQS1_POPTR; VOZ family protein
STRING	POPTR_0019s12260.1	0.0	(Populus trichocarpa)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF1498	34	94

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28520.2	1e-175	vascular plant one zinc finger protein

Publications ? help Back to Top
Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] Yasui Y,Kohchi T VASCULAR PLANT ONE-ZINC FINGER1 and VOZ2 repress the FLOWERING LOCUS C clade members to control flowering time in Arabidopsis. Biosci. Biotechnol. Biochem., 2014. 78(11): p. 1850-5 [PMID:25351333] Kumar S,Choudhary P,Gupta M,Nath U VASCULAR PLANT ONE-ZINC FINGER1 (VOZ1) and VOZ2 Interact with CONSTANS and Promote Photoperiodic Flowering Transition. Plant Physiol., 2018. 176(4): p. 2917-2930 [PMID:29507119] Song C,Lee J,Kim T,Hong JC,Lim CO VOZ1, a transcriptional repressor of DREB2C, mediates heat stress responses in Arabidopsis. Planta, 2018. 247(6): p. 1439-1448 [PMID:29536220]