PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

CCG011654.1

Organism

Populus euphratica

Taxonomic ID

75702

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus

Family

C3H

Protein Properties

Length: 1137aa MW: 126702 Da PI: 4.9209

Description

C3H family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
CCG011654.1	genome	LZU	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-CCCH	19.7	1.5e-06	1020	1042	3	26
S---SGGGGTS--TTTTT-SS-SS CS zf-CCCH 3 telCrffartGtCkyGdrCkFaHg 26 +++C +far G+Ck ++C+F+Hg CCG011654.1 1020 YKPCLYFAR-GFCKNEESCRFSHG 1042 789****.***********9 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
TIGRFAMs	TIGR00794	5.3E-225	111	853	IPR003855	Potassium transporter
Pfam	PF02705	8.3E-171	112	687	IPR003855	Potassium transporter
PROSITE profile	PS50103	13.723	1017	1044	IPR000571	Zinc finger, CCCH-type
SMART	SM00356	4.0E-4	1019	1043	IPR000571	Zinc finger, CCCH-type
Gene3D	G3DSA:4.10.1000.10	1.7E-4	1021	1044	IPR000571	Zinc finger, CCCH-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0071805	Biological Process	potassium ion transmembrane transport
GO:0016020	Cellular Component	membrane
GO:0015079	Molecular Function	potassium ion transmembrane transporter activity
GO:0046872	Molecular Function	metal ion binding

Sequence ? help Back to Top
Protein Sequence Length: 1137 aa Download sequence Send to blast
MAEENGIGRS EINGGFASMD SMELRWVFQD DDDEDDDDSV MDDHNGDDNS RQLHGGGLES 60 DEEDEEDTGE QRLFRTGPLI DPFDVEALEI PSAHRNDNYY EELGVGRRII LAFQTLGVVF 120 GDVGTSPLYT FGVMFTKAPI NGEEDVVGAL SLVLYTLILI PLLKYVLVVL WANDDGEGGT 180 FALYSLICRH AQVNLLPNQL PSDARISSFR LKVPSPELER SLKIKERLET SVTLKRLLLM 240 LVLAGTSMLI ADGVVTPAMS VMSAVGGLKV GVAAIEQEHV VMISVAFLVI LFSVQKFGTS 300 KVGLVVGPAL FLWFCSLAAI GIYNLVKYDS SVLRAFNPVH IYYFFKRNST KAWRALGGCF 360 LCATGAEAMF ADLCYFSVRS VQLTFVFLVL PCLLLGYLGQ AAYLVEHHTE NMAELAFFSS 420 VPSGVFWPVF LIANLAALIA SRTMTTATFS CIKQSTALGC FPRLKIIHTS RKFMGQIYIP 480 VINWFLLVVC LVFVCSISSI TEMGNAYGIA ELGVMMMTMI LVTIVMLLIW QINIIIVLSF 540 LVIFLGIELA FFSSVLGGMG DGSWIILVFA VVMFLIMLVW NYGSKLKYET EVKQKLSLDS 600 MRELGPNLGT IRAPGIGLLY NELVKGIPAI FGHFLTTLPA IHSMIIFVSV KYVPVPVVPQ 660 GERFLFRRVC PKGYHIFRCI ARYGYKDARK ENQQAFEQLL IESLEKFIHR EAQERLLESD 720 GDDDTDYEDD SSSTRVFITP NGSVYSLGVP LLAEYINTSK PISEASTSEA AKPGMPGDPT 780 GSDAEQSLER ELSFVRKAKE SGVVYLLGHG NIRARKDSWF IKKLVINYFY AFLRKNCRRG 840 IANMSVPHSH LMQKQKVQDL WMDGDPTNIV HDGQKFENRS TSITEVHKLV DISGGLGMLE 900 FPRLASPVPE PDSSTGRMQN IDTPATLTPS VDGNDSIFEE EECILDLGTS SCEEKELVYE 960 GKLTRNFLKN NASQLISPDL FCLQDGLNER ELRIFIMDNG EELIPGYLEF IKEIVHYVGY 1020 KPCLYFARGF CKNEESCRFS HGVENMVEVN GGGGVLVRKI EEQNKTREIG TTATTTGDGF 1080 CNFGRLRGGR NDFFAMGIGE KENLASRHII DEDVSDYFSS FRPVQDVRTP YQQKWMV

Sequence ? help Back to Top

Protein Sequence Length: 1137 aa Download sequence Send to blast

MAEENGIGRS EINGGFASMD SMELRWVFQD DDDEDDDDSV MDDHNGDDNS RQLHGGGLES  60
DEEDEEDTGE QRLFRTGPLI DPFDVEALEI PSAHRNDNYY EELGVGRRII LAFQTLGVVF  120
GDVGTSPLYT FGVMFTKAPI NGEEDVVGAL SLVLYTLILI PLLKYVLVVL WANDDGEGGT  180
FALYSLICRH AQVNLLPNQL PSDARISSFR LKVPSPELER SLKIKERLET SVTLKRLLLM  240
LVLAGTSMLI ADGVVTPAMS VMSAVGGLKV GVAAIEQEHV VMISVAFLVI LFSVQKFGTS  300
KVGLVVGPAL FLWFCSLAAI GIYNLVKYDS SVLRAFNPVH IYYFFKRNST KAWRALGGCF  360
LCATGAEAMF ADLCYFSVRS VQLTFVFLVL PCLLLGYLGQ AAYLVEHHTE NMAELAFFSS  420
VPSGVFWPVF LIANLAALIA SRTMTTATFS CIKQSTALGC FPRLKIIHTS RKFMGQIYIP  480
VINWFLLVVC LVFVCSISSI TEMGNAYGIA ELGVMMMTMI LVTIVMLLIW QINIIIVLSF  540
LVIFLGIELA FFSSVLGGMG DGSWIILVFA VVMFLIMLVW NYGSKLKYET EVKQKLSLDS  600
MRELGPNLGT IRAPGIGLLY NELVKGIPAI FGHFLTTLPA IHSMIIFVSV KYVPVPVVPQ  660
GERFLFRRVC PKGYHIFRCI ARYGYKDARK ENQQAFEQLL IESLEKFIHR EAQERLLESD  720
GDDDTDYEDD SSSTRVFITP NGSVYSLGVP LLAEYINTSK PISEASTSEA AKPGMPGDPT  780
GSDAEQSLER ELSFVRKAKE SGVVYLLGHG NIRARKDSWF IKKLVINYFY AFLRKNCRRG  840
IANMSVPHSH LMQKQKVQDL WMDGDPTNIV HDGQKFENRS TSITEVHKLV DISGGLGMLE  900
FPRLASPVPE PDSSTGRMQN IDTPATLTPS VDGNDSIFEE EECILDLGTS SCEEKELVYE  960
GKLTRNFLKN NASQLISPDL FCLQDGLNER ELRIFIMDNG EELIPGYLEF IKEIVHYVGY  1020
KPCLYFARGF CKNEESCRFS HGVENMVEVN GGGGVLVRKI EEQNKTREIG TTATTTGDGF  1080
CNFGRLRGGR NDFFAMGIGE KENLASRHII DEDVSDYFSS FRPVQDVRTP YQQKWMV

Functional Description ? help Back to Top
Source	Description
UniProt	Probable potassium transporter.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011002070.1	0.0	PREDICTED: potassium transporter 7
Swissprot	Q9FY75	0.0	POT7_ARATH; Potassium transporter 7
TrEMBL	B9GF97	0.0	B9GF97_POPTR; Potassium transporter
STRING	POPTR_0001s21310.1	0.0	(Populus trichocarpa)

Publications ? help Back to Top
Mäser P, et al. Phylogenetic relationships within cation transporter families of Arabidopsis. Plant Physiol., 2001. 126(4): p. 1646-67 [PMID:11500563] Waters BM,Grusak MA Quantitative trait locus mapping for seed mineral concentrations in two Arabidopsis thaliana recombinant inbred populations. New Phytol., 2008. 179(4): p. 1033-47 [PMID:18631293] Al-Younis I,Wong A,Gehring C The Arabidopsis thaliana K(+)-uptake permease 7 (AtKUP7) contains a functional cytosolic adenylate cyclase catalytic centre. FEBS Lett., 2015. 589(24 Pt B): p. 3848-52 [PMID:26638082] Han M,Wu W,Wu WH,Wang Y Potassium Transporter KUP7 Is Involved in K(+) Acquisition and Translocation in Arabidopsis Root under K(+)-Limited Conditions. Mol Plant, 2016. 9(3): p. 437-446 [PMID:26851373]