PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CCG007526.1
Organism
Populus euphratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
Family BES1
Protein Properties Length: 332aa    MW: 36092.4 Da    PI: 7.9633
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CCG007526.1genomeLZUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822215.51.3e-6651481148
       DUF822   1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspesslqssl 98 
                  g+s r ptwkErEnn rRERrRRaiaakiy+GLR qGnyklpk++DnneVlkALc+eAGw+ve+DGttyrkg+kp+  +e+ag  a++s +ss+q s+
  CCG007526.1   5 GSSARLPTWKERENNMRRERRRRAIAAKIYTGLRTQGNYKLPKHCDNNEVLKALCAEAGWIVEEDGTTYRKGCKPP-PSEIAGMPANISACSSIQPSP 101
                  5899************************************************************************.********************* PP

       DUF822  99 kssalaspvesysaspksssfpspssldsislasaasllpvlsvlslvss 148
                  +ss++aspv+sy+asp+sssfpsps +d +s+   + llp+l++ ++++ 
  CCG007526.1 102 QSSNFASPVPSYHASPSSSSFPSPSCFDGNSS---TYLLPFLRNIASIPT 148
                  ****************************9966...699999999887655 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056878.6E-637130IPR008540BES1/BZR1 plant transcription factor, N-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009741Biological Processresponse to brassinosteroid
GO:0005634Cellular Componentnucleus
GO:0005737Cellular Componentcytoplasm
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 332 aa     Download sequence    Send to blast
MTAGGSSARL PTWKERENNM RRERRRRAIA AKIYTGLRTQ GNYKLPKHCD NNEVLKALCA  60
EAGWIVEEDG TTYRKGCKPP PSEIAGMPAN ISACSSIQPS PQSSNFASPV PSYHASPSSS  120
SFPSPSCFDG NSSTYLLPFL RNIASIPTNL PPLRISNSAP VTPPRSSPTC RSSKRKVDWE  180
SLSNGSLNSF RHPLFAASAP SSPTRRPHLT PATIPECDES DASTVDSGLW LSFHAVAPQV  240
APPSPTFNLV KPVDPQCAFQ IGVDRHEGLS WGVAAERGRG TEFEFENCTV KPWEGERIHE  300
IGVDDLELTL GSGKVHGQAS IDDLAWERSN KL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zd4_A7e-30986372449Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B7e-30986372449Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C7e-30986372449Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D7e-30986372449Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEF1480140.0EF148014.1 Populus trichocarpa clone WS0126_M10 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010999949.10.0PREDICTED: BES1/BZR1 homolog protein 2-like
SwissprotQ94A431e-115BEH2_ARATH; BES1/BZR1 homolog protein 2
TrEMBLA9PI050.0A9PI05_POPTR; BES1 family protein
STRINGPOPTR_0005s12790.10.0(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF127534105
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75080.25e-91BES1 family protein