PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CCG003845.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
Family ARR-B
Protein Properties Length: 682aa    MW: 75349.2 Da    PI: 8.7004
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CCG003845.1genomeLZUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like49.96.9e-16383436155
      G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                  k rl W+++L  +F++a++ L G +kA P +ile m+v++L++ +v S LQkY+ 
  CCG003845.1 383 KSRLIWNQDLQLKFMSAISAL-GDKKARPEKILEKMNVPCLSRRQVSSRLQKYKA 436
                  68*******************.9******************************85 PP

2Response_reg29.63.4e-112611222107
                   TCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTT.SEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTESEEEESS--HHHH CS
  Response_reg  22 gyeevaeaddgeealellkekd..pDlillDiempg.mdGlellkeireeepklpiivvtahgeeedalealkaGakdflsKpfdpeel 107
                    ++++++++ +++al +++e +  + l++  ++  + +d l +++e+ +++  +p+i+++++ + ++a +a+kaGa+ +l Kp++  +l
   CCG003845.1  26 FMKICTTTRLASAALSMIREGKdkFKLVMASVNVTNnVDSLGFIRELFKKK--IPVIAISSERSVSTACKAMKAGASLCLDKPTSLYDL 112
                   567889999*********888888**********999**********7755..9*****************************987665 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5011016.1811120IPR001789Signal transduction response regulator, receiver domain
Gene3DG3DSA:3.40.50.23006.9E-932127No hitNo description
SuperFamilySSF521721.29E-738122IPR011006CheY-like superfamily
SuperFamilySSF466892.69E-11381441IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.602.3E-17381440IPR009057Homeodomain-like
TIGRFAMsTIGR015573.4E-14383435IPR006447Myb domain, plants
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000160Biological Processphosphorelay signal transduction system
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 682 aa     Download sequence    Send to blast
MVARTIEKAG SSIFPAVCNN AYSTIFMKIC TTTRLASAAL SMIREGKDKF KLVMASVNVT  60
NNVDSLGFIR ELFKKKIPVI AISSERSVST ACKAMKAGAS LCLDKPTSLY DLKYLWQYVF  120
EKTTICRVKL NIRKVSQGIV VKDEGGETEV PDGIVLDGAA GYQNDTVPSS KGNGQVVGFE  180
DLDATNRQQT MAGLEVEVEE YGASRQQMKA DPKGEGMKIK GEIILNGNIN GQQMIIPNAN  240
NSEDNKDKQV DAQVLHRINN YNQPMTQLKT RGRKNGVEQV AMVKENFTKD AESTAIEMSV  300
LAEIQKHDDS VITRSQQQSG SKRRADGDEW RRIKERRVEA NSEVISSGTK INLEKQKEIE  360
GNKGEGTERF KNYINTDSST EKKSRLIWNQ DLQLKFMSAI SALGDKKARP EKILEKMNVP  420
CLSRRQVSSR LQKYKAQIRR IYDHAIADSS PSNEPSPFNS RTGVLLLKTR PVRGQAGHQG  480
SDYGIEGEKS KILKAPSDGV NQDVFFSRLS GNRNKAPLMS AWTLKGGKQG YGGEHFTIEK  540
VAKSIKLATI STGRNRKMDC ITPPNPASGN VHDAIPTIST DENRNLDPRV SNPNPDNLIN  600
TDEFMKNLNE AIQELDATAV TGPPSCSSNQ SQSLSKFTDM LNLLEEEPVN SKGLTDEPCP  660
DEVARYLDSL SEILLENDSP QP
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024466462.10.0two-component response regulator ORR21
TrEMBLA0A2K1YSQ01e-169A0A2K1YSQ0_POPTR; Uncharacterized protein
STRINGPOPTR_0010s12900.11e-170(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF3923222
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16110.12e-16response regulator 2