PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | CCG002141.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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Family | GRAS | ||||||||
Protein Properties | Length: 200aa MW: 23217.6 Da PI: 9.512 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 21.9 | 1.9e-07 | 142 | 197 | 274 | 329 |
GRAS 274 klpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvpl 329 +++r s+ +++ l+r+i+nvva eg +r+erh t+++ +erl++ G ++ +l CCG002141.1 142 TFSRVSHRFPLFSEMHLKRQISNVVASEGIDRFERHLTFSHGQERLSQDGSRSTQL 197 4555566666778999********************************99887766 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF03514 | 6.6E-5 | 142 | 197 | IPR005202 | Transcription factor GRAS |
Sequence ? help Back to Top |
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Protein Sequence Length: 200 aa Download sequence Send to blast |
MAISNLQIFF FEEMEGPRYA ETSEVTKKVV RCFAESLARQ VHGLHPSNPI PLLPCIEMQN 60 PSHLFATTAT NYDMLETLIT GRSKPFHFID FSMVLSSRYW RCWIRKSFLL LKIIAVDQYQ 120 TKSITTRWSS ATVHMPAAYH STFSRVSHRF PLFSEMHLKR QISNVVASEG IDRFERHLTF 180 SHGQERLSQD GSRSTQLWSN |