PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CCG001613.2
Organism
Populus euphratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
Family bZIP
Protein Properties Length: 415aa    MW: 44943.8 Da    PI: 8.6946
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CCG001613.2genomeLZUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_149.68.9e-16207262358
                  XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevak 58 
                  + kr rr+ +NRe+ArrsR+RK+a + eLe+ v++L  eN++L k+l   ++++ k
  CCG001613.2 207 DAKRVRRMLSNRESARRSRRRKQAHLTELETQVAQLRVENSSLLKRLADTSQKYNK 262
                  689****************************************9888877777765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003384.1E-19205269IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1706.2E-12206262No hitNo description
PROSITE profilePS5021711.392207262IPR004827Basic-leucine zipper domain
PfamPF001702.4E-13208261IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.73E-11209258No hitNo description
PROSITE patternPS000360212227IPR004827Basic-leucine zipper domain
PfamPF124984.7E-44276403IPR020983Basic leucine-zipper, C-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0071215Biological Processcellular response to abscisic acid stimulus
GO:0071333Biological Processcellular response to glucose stimulus
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0042802Molecular Functionidentical protein binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 415 aa     Download sequence    Send to blast
MNRSESEWAF QRFLQEASAA TFDDNTPNSS ADKTDVVHIN DYGYSNNNAT SKSCDNNYKE  60
NAMPLSNGAC ATAASLSLGA PADIPVDSED YHAFLKSKLN MACAAVALSR AYFVKPLKSP  120
ATAESGSQAS STSHLGSHAP SKGAGHDLSR SREKDANEPL GNPSLPSMQK KLAVTGKPTT  180
SGSSRELSED DENEAETKIT ENMHPADAKR VRRMLSNRES ARRSRRRKQA HLTELETQVA  240
QLRVENSSLL KRLADTSQKY NKSAVDNRIL KADIETLREK VRMAEEKVKR FTGLNHVFHA  300
MPDVSTMSMP SFDGCPSDTS ADAAVPVKDD SKHHIYQAPN NAISTHDSRP RVNFVLADIS  360
SVENVQPNSG TAAGVSGNKL GRTASLQRVA SLERLQKRIR GGASPCGPQS NGEQS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1221228RRSRRRKQ
2223228SRRRKQ
Functional Description ? help Back to Top
Source Description
UniProtBinds to the G-box-like motif (5'-ACGTGGC-3') of the chalcone synthase (CHS) gene promoter. G-box and G-box-like motifs are defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00040PBMTransfer from AT5G28770Download
Motif logo
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEF1482940.0EF148294.1 Populus trichocarpa x Populus deltoides clone WS01312_M14 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011032410.10.0PREDICTED: light-inducible protein CPRF2
SwissprotQ990901e-117CPRF2_PETCR; Light-inducible protein CPRF2
TrEMBLA0A2K2ABZ10.0A0A2K2ABZ1_POPTR; Uncharacterized protein
STRINGPOPTR_0005s05470.10.0(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF41763358
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28770.27e-71bZIP family protein
Publications ? help Back to Top
  1. Weisshaar B,Armstrong GA,Block A,da Costa e Silva O,Hahlbrock K
    Light-inducible and constitutively expressed DNA-binding proteins recognizing a plant promoter element with functional relevance in light responsiveness.
    EMBO J., 1991. 10(7): p. 1777-86
    [PMID:2050115]