PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CCG000382.1
Organism
Populus euphratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
Family ERF
Protein Properties Length: 745aa    MW: 84870.9 Da    PI: 6.7994
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CCG000382.1genomeLZUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.61.5e-184291255
          AP2  2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                 +y GVr+++ +grWvAeI+d      ++ r++lg+++taeeAa+a+++a+  l+g
  CCG000382.1 42 RYLGVRQRP-SGRWVAEIKDtI----QKIRVWLGTYDTAEEAARAYDEAACLLRG 91
                 799******.7*********33....35**********************99998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.31E-304198No hitNo description
PROSITE profilePS5103219.8624299IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.103.6E-274298IPR001471AP2/ERF domain
PfamPF008473.1E-134291IPR001471AP2/ERF domain
SMARTSM003806.6E-3542105IPR001471AP2/ERF domain
SuperFamilySSF541715.95E-194299IPR016177DNA-binding domain
PRINTSPR003677.5E-84354IPR001471AP2/ERF domain
PRINTSPR003677.5E-86581IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 745 aa     Download sequence    Send to blast
MARKRKAGEG EEERVSNDGN VGWDQMMEDA ESLHGVRRAR KRYLGVRQRP SGRWVAEIKD  60
TIQKIRVWLG TYDTAEEAAR AYDEAACLLR GANTRTNFWP CSPSLHSKPA LPPKIVNLLL  120
LRIKARHNSL TQTTTFPVNQ QEQEAREQES QFDHFFEMPG DISIVENSDT ANSTADTMTI  180
SDHTSGFFES RYITEDHGST STFEVDDSWR NVDGSGQGGQ EEGRGEEEID MGLIDFQFDD  240
ALGSSFYHSP FDIAQEMMEP MEQEHHGDEP PMIREIMKRW KHERKFSASL YAYNGVSECL  300
RLAFRPGMPA VANGGYELPS NLGINSNNNE EEKKRDDMGK DAKEEVQEEV EIPQTPTEKG  360
SSSSSSYLSK EDVARERLQS VYNANRVVFS AKVHDSKEVM ADIHGTLDWK TLIFKPPLQE  420
KKKTPLPPQV QYDMFHTFVP YLALRIKIPS SSCYPLLPLN FFEIDMGPSS KPCVDNRSLH  480
HRFFEWNLLD SHVLEGTRIQ RWALISFGVT LDQKPNNTKF INRLSQRRQW NILDSYVFEG  540
TRIQRWALIS FGVTLDQKSN IPKFLNRLSQ RCEQLGIFLN KNTIISPQYE PTQALNNVSL  600
LESKLKKIHS AASNDLQLLI CVMEKKHKGY ADLKRIAETR QVLTPRLLRP NEPVMFMGAD  660
VTHPHPLDDI SPSAVAVWSR GDITQGSFLV RLIHLQLRTN FLKKKIPPGT VVDTDYTSKG  720
IRFLSMQPLG SERYKQASTL PCPVG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A3e-133598771Ethylene-responsive transcription factor ERF096
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011027897.10.0PREDICTED: ethylene-responsive transcription factor RAP2-11-like
TrEMBLB9HIA90.0B9HIA9_POPTR; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF33383267
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.11e-17related to AP2 11