PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PEQU_41910

Organism

Phalaenopsis equestris

Taxonomic ID

78828

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis

Family

NAC

Protein Properties

Length: 316aa MW: 36407 Da PI: 7.0483

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PEQU_41910	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	149.8	1.3e-46	11	137	3	128
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..kgel 99 pGfrFhPt+eel+ +yL++ + gkkl++ ++i ++++y ++PwdLp+++k +e+ewyfF++rd+++++g r+nr+t++g+Wkatg+d+++ s ++l PEQU_41910 11 PGFRFHPTEEELLEFYLRRAACGKKLNF-DIIGTLNLYLYDPWDLPAMAKIGEREWYFFVPRDRRHSNGGRPNRTTERGFWKATGSDRPIRSVvdPRRL 108 9***********************99.99***********99999***********************************998777889 PP NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128 +glkktLv+y grap+g+ktdWvm+eyrl PEQU_41910 109 IGLKKTLVYYCGRAPRGNKTDWVMNEYRL 137 *************************98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51005	54.291	9	162	IPR003441	NAC domain
SuperFamily	SSF101941	3.14E-55	10	162	IPR003441	NAC domain
Pfam	PF02365	2.6E-24	11	137	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 316 aa Download sequence Send to blast
MERNGSELDL PGFRFHPTEE ELLEFYLRRA ACGKKLNFDI IGTLNLYLYD PWDLPAMAKI 60 GEREWYFFVP RDRRHSNGGR PNRTTERGFW KATGSDRPIR SVVDPRRLIG LKKTLVYYCG 120 RAPRGNKTDW VMNEYRLPSF PNQSSTSNSF KEDIVLCKVY RKAASLKELE HRAAMEEDSR 180 ASHGGTMSAT SSEQDDVQRL GYDEVIMEMK EEFEINIPTD QFSSSTEDQF RSPTLPLLDS 240 SQAYRSLPIG FESTTKVQGQ PNLLSKTPVN RQAPKLPALQ VPNHTSFDWV QDPFLSQLRS 300 PWLDQWSPLY ANLLNL

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
3ulx_A	8e-52	6	162	11	168	Stress-induced transcription factor NAC1
Search in ModeBase

Functional Description ? help Back to Top
Source	Description
UniProt	Transcription activator that binds sequence-specific DNA motifs. Involved in stress response. Plays a positive role in drought and salt stress tolerance through the modulation of abscisic acid-mediated signaling. {ECO:0000269\|PubMed:26834774}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: Induced by drought stress, salt stress and abscisic acid (ABA). {ECO:0000269\|PubMed:26834774}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020598491.1	0.0	NAC transcription factor 32-like
Swissprot	Q10S65	1e-103	NAC22_ORYSJ; NAC domain-containing protein 22
TrEMBL	A0A2I0W0W6	1e-179	A0A2I0W0W6_9ASPA; NAC domain-containing protein 94
STRING	XP_008813634.1	1e-115	(Phoenix dactylifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP1770	38	105

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G17040.1	8e-84	NAC domain containing protein 36

Publications ? help Back to Top
Hong Y,Zhang H,Huang L,Li D,Song F Overexpression of a Stress-Responsive NAC Transcription Factor Gene ONAC022 Improves Drought and Salt Tolerance in Rice. Front Plant Sci, 2016. 7: p. 4 [PMID:26834774]