PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PEQU_41524 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
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Family | ERF | ||||||||
Protein Properties | Length: 192aa MW: 21454.9 Da PI: 5.2438 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 49.8 | 8.7e-16 | 20 | 69 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +ykGVr +k +g+Wv+e+r p++ r r++lg+++++e+Aa+a +a l+g PEQU_41524 20 KYKGVRKRK-WGKWVSEVRLPNS---RERIWLGSYDSPEKAARAFDAGSFLLRG 69 8*****999.*******999833...5*****************9986666665 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00018 | 1.74E-27 | 20 | 79 | No hit | No description |
Gene3D | G3DSA:3.30.730.10 | 1.5E-27 | 20 | 78 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 6.3E-27 | 20 | 83 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 1.4E-9 | 20 | 62 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 21.338 | 20 | 77 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 3.86E-19 | 20 | 79 | IPR016177 | DNA-binding domain |
PRINTS | PR00367 | 4.3E-9 | 21 | 32 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 4.3E-9 | 43 | 59 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0001944 | Biological Process | vasculature development | ||||
GO:0002213 | Biological Process | defense response to insect | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0009611 | Biological Process | response to wounding | ||||
GO:0051301 | Biological Process | cell division | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 192 aa Download sequence Send to blast |
MANPVESTAA AAFAASAAVK YKGVRKRKWG KWVSEVRLPN SRERIWLGSY DSPEKAARAF 60 DAGSFLLRGH RASLNFPDQI QDISMYCSRL NPTSQQIQIA AARYAHADYP AQSQPSEQPV 120 LQPAECSPSP SPSLSPAANH WEYMDQLISP TVMGIHDFSS YDLTNPSEQF AQMDLDAENC 180 YDFVRSSDLW EF |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5wx9_A | 3e-14 | 20 | 79 | 14 | 74 | Ethylene-responsive transcription factor ERF096 |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 21 | 27 | KGVRKRK |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00601 | PBM | Transfer from AT1G74930 | Download |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020595118.1 | 1e-142 | ethylene-responsive transcription factor ERF018-like | ||||
TrEMBL | A0A2I0WF11 | 7e-66 | A0A2I0WF11_9ASPA; Ethylene-responsive transcription factor ERF018 |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP861 | 32 | 144 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G19210.1 | 7e-32 | ERF family protein |