PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PEQU_41138 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
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Family | SAP | ||||||||
Protein Properties | Length: 99aa MW: 10863.4 Da PI: 8.2262 | ||||||||
Description | SAP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SAP | 70.6 | 2.2e-22 | 2 | 97 | 368 | 454 |
SAP 368 vrrvenleevcrfrvrg.........aqrgvlgCvnggyalvyagg.vlrvWeiekkegylyslrervgevnalvaddrhvavsssdgtihlldfga 454 vr +leevcrf v g r v+gC+n g+++++ gg rvW+ + e +ly +r+rvgev a a+dr+va+ ++d+ +hl+dfga PEQU_41138 2 VRVGRTLEEVCRFGVVGrrrgeegavRGRVVIGCMNWGFVMMWVGGgGGRVWDAATGE-LLYGFRQRVGEVRAAAASDRYVAAWAEDSGLHLWDFGA 97 677789*******996633333332223569***********9887589****99966.*************************************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF50998 | 1.96E-5 | 29 | 94 | IPR011047 | Quinoprotein alcohol dehydrogenase-like superfamily |
Gene3D | G3DSA:2.130.10.10 | 1.4E-4 | 51 | 95 | IPR015943 | WD40/YVTN repeat-like-containing domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0005515 | Molecular Function | protein binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 99 aa Download sequence Send to blast |
MVRVGRTLEE VCRFGVVGRR RGEEGAVRGR VVIGCMNWGF VMMWVGGGGG RVWDAATGEL 60 LYGFRQRVGE VRAAAASDRY VAAWAEDSGL HLWDFGAEL |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020597083.1 | 1e-50 | LOW QUALITY PROTEIN: transcriptional regulator STERILE APETALA, partial | ||||
TrEMBL | A0A2H3X4T7 | 2e-26 | A0A2H3X4T7_PHODC; transcriptional regulator STERILE APETALA | ||||
TrEMBL | M0T2W0 | 4e-27 | M0T2W0_MUSAM; Uncharacterized protein | ||||
STRING | XP_008778313.1 | 3e-27 | (Phoenix dactylifera) | ||||
STRING | GSMUA_Achr6P00120_001 | 6e-28 | (Musa acuminata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP18481 | 7 | 9 |