PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PEQU_40030 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
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Family | MYB_related | ||||||||
Protein Properties | Length: 133aa MW: 15394.1 Da PI: 4.6713 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 22.6 | 2.5e-07 | 1 | 24 | 24 | 48 |
HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 24 WktIartmgkgRtlkqcksrwqkyl 48 W++Ia++++ gRt++++k+ w+++l PEQU_40030 1 WSAIAAKLP-GRTDNEIKNVWHSHL 24 *********.***********9986 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF46689 | 8.07E-7 | 1 | 31 | IPR009057 | Homeodomain-like |
Gene3D | G3DSA:1.10.10.60 | 2.5E-11 | 1 | 25 | IPR009057 | Homeodomain-like |
CDD | cd00167 | 5.75E-4 | 1 | 24 | No hit | No description |
PROSITE profile | PS51294 | 15.05 | 1 | 28 | IPR017930 | Myb domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 133 aa Download sequence Send to blast |
WSAIAAKLPG RTDNEIKNVW HSHLKKRLNP NQSMKDSKRR NRNNSMMEDM KLQKYAEEPG 60 CSTEDSMDFL RHLPEIGEIL TSEAQTESNS WAGEEEEEES AVKNFDLLRS SNEDDIRFWM 120 SLLAEAGNLE CFK |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020570793.1 | 5e-93 | myb-related protein Myb4-like | ||||
TrEMBL | A0A2I0X7N6 | 4e-49 | A0A2I0X7N6_9ASPA; Myb-related protein Myb4 |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP37788 | 2 | 3 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G23250.2 | 6e-15 | myb domain protein 15 |