PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PEQU_38670

Organism

Phalaenopsis equestris

Taxonomic ID

78828

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis

Family

WRKY

Protein Properties

Length: 132aa MW: 15169.2 Da PI: 9.8868

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PEQU_38670	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	36.7	8.2e-12	84	105	1	22
---SS-EEEEEEE--TT-SS-E CS WRKY 1 ldDgynWrKYGqKevkgsefpr 22 ldDgy+WrKYGqK vk+++fpr PEQU_38670 84 LDDGYRWRKYGQKAVKNNNFPR 105 59*******************9 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:2.20.25.80	2.5E-13	69	105	IPR003657	WRKY domain
SuperFamily	SSF118290	3.27E-10	76	106	IPR003657	WRKY domain
PROSITE profile	PS50811	12.851	79	105	IPR003657	WRKY domain
SMART	SM00774	9.4E-5	84	128	IPR003657	WRKY domain
Pfam	PF03106	3.5E-8	85	106	IPR003657	WRKY domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 132 aa Download sequence Send to blast
MEKYNITSAS STFCAHHNYS HSEAIQMNNL HALEKKEVFE MDGGDDDDVK GSSIGVSGGK 60 KKKGEKKVRR PRFAFQTRSQ VDILDDGYRW RKYGQKAVKN NNFPRYIILL YSPFFSNFLG 120 TIYIFVSVIN MV

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020589897.1	3e-73	probable WRKY transcription factor 43
STRING	Traes_2AS_D0C21ADB5.1	1e-25	(Triticum aestivum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP37506	3	3

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G13080.1	1e-19	WRKY DNA-binding protein 75