PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_38388
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family ERF
Protein Properties Length: 165aa    MW: 18406.8 Da    PI: 10.3984
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_38388genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP231.35e-104170336
         AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkf 36
                ++GVr +k +g+WvAeIr+p+   kr r++l  +
  PEQU_38388 41 FRGVRMRK-WGKWVAEIREPN---KRSRIWLRPY 70
                8*****99.**********93...3699999765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003803.0E-1940101IPR001471AP2/ERF domain
PROSITE profilePS5103215.0924095IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.0E-194196IPR001471AP2/ERF domain
PRINTSPR003674.9E-84152IPR001471AP2/ERF domain
PfamPF008475.8E-54167IPR001471AP2/ERF domain
CDDcd000181.80E-174196No hitNo description
SuperFamilySSF541713.66E-124197IPR016177DNA-binding domain
PRINTSPR003674.9E-87797IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 165 aa     Download sequence    Send to blast
MEERKEERSL RPPPQPPLPS QQPLQPQPPP AAVAEGKERP FRGVRMRKWG KWVAEIREPN  60
KRSRIWLRPY FTPLAGARSF AVYPLRGRSA RLNFPDELDP EEATGGLTAE VNAASLSSAT  120
IRKKASEVGL RVDALQQQGL TAKSSRSCKN PDLNQQPSPE SSDDD
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020596893.11e-115ethylene-responsive transcription factor RAP2-1-like
SwissprotQ8LC302e-35RAP21_ARATH; Ethylene-responsive transcription factor RAP2-1
TrEMBLA0A455LAF97e-62A0A455LAF9_9ASPA; Ethylene-responsive transcription factor RAP2-like protein (Fragment)
STRINGGSMUA_AchrUn_randomP26940_0012e-47(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP39433075
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50260.15e-37cooperatively regulated by ethylene and jasmonate 1
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]