PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PEQU_38095

Organism

Phalaenopsis equestris

Taxonomic ID

78828

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis

Family

bHLH

Protein Properties

Length: 386aa MW: 42516.8 Da PI: 5.6799

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PEQU_38095	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	29.5	1.3e-09	197	244	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + +k Ka +L + ++Y++ Lq PEQU_38095 197 SHSLAERVRREKISQRMKLLQDLVPGC----NKITGKALMLDEIINYVQALQ 244 8************************....999**************99 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF47459	3.01E-16	191	260	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	2.23E-9	191	248	No hit	No description
PROSITE profile	PS50888	15.256	193	243	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:4.10.280.10	1.4E-15	193	258	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Pfam	PF00010	7.2E-7	197	244	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SMART	SM00353	4.4E-9	199	249	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 386 aa Download sequence Send to blast
MESLSSILPP PHSGEMAGLM GNSLNYMHAN NLMQLPTDPG FAERAARYSC FSSANYGAFS 60 VIPEAAGVLS MVSSSRCVKG KESSGQSRAQ LEMGDGEFGS SKEDSSVTDP ASVPGESHAK 120 KRKATARRKV KVTAENDLNA KKCRSSEGSE IEKRSITPKE EENVDEKKHE KEDGEKSPEP 180 SKDYTYVRAR RGQATDSHSL AERVRREKIS QRMKLLQDLV PGCNKITGKA LMLDEIINYV 240 QALQRQVEFL SMKLATVNPG LDFNLENLIS KETLLNQANA SFSSLLYPLE NLSASVINFD 300 QHSNEESPIP FTLANGIDYH CSTLHKAAIM QSSLDMFAAS ASQAENLWDE ELHSVLQSSF 360 GLNQEIEVTS PIRAFLLSIA QMRIEF

Sequence ? help Back to Top

Protein Sequence Length: 386 aa Download sequence Send to blast

MESLSSILPP PHSGEMAGLM GNSLNYMHAN NLMQLPTDPG FAERAARYSC FSSANYGAFS  60
VIPEAAGVLS MVSSSRCVKG KESSGQSRAQ LEMGDGEFGS SKEDSSVTDP ASVPGESHAK  120
KRKATARRKV KVTAENDLNA KKCRSSEGSE IEKRSITPKE EENVDEKKHE KEDGEKSPEP  180
SKDYTYVRAR RGQATDSHSL AERVRREKIS QRMKLLQDLV PGCNKITGKA LMLDEIINYV  240
QALQRQVEFL SMKLATVNPG LDFNLENLIS KETLLNQANA SFSSLLYPLE NLSASVINFD  300
QHSNEESPIP FTLANGIDYH CSTLHKAAIM QSSLDMFAAS ASQAENLWDE ELHSVLQSSF  360
GLNQEIEVTS PIRAFLLSIA QMRIEF

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020595504.1	0.0	transcription factor bHLH78-like isoform X1
TrEMBL	A0A2I0XEI6	0.0	A0A2I0XEI6_9ASPA; Transcription factor bHLH62
STRING	XP_008792945.1	1e-100	(Phoenix dactylifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP919	38	137

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G07340.1	9e-60	bHLH family protein