PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PEQU_37236

Organism

Phalaenopsis equestris

Taxonomic ID

78828

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis

Family

Trihelix

Protein Properties

Length: 402aa MW: 45800.4 Da PI: 4.3039

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PEQU_37236	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	46.4	1e-14	145	229	2	86
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 W+++ + aL++a ++ + +r++l+ W ev+kk+ + + rs qC+++++ l+k+ykk+k+ + s+ ss+++yf++++ PEQU_37236 145 WSEDSTFALLDAWGDRYLQNGRKSLRSDEWGEVAKKVsQGSKTPRSEAQCRNRLDTLKKKYKKEKAKHPDY-SGLSSKWVYFQKMD 229 ***********************************4445679*********************97.66677******8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF13837	3.1E-21	143	231	No hit	No description

Sequence ? help Back to Top
Protein Sequence Length: 402 aa Download sequence Send to blast
MEDDARYPPN PYPQINRRPF PSSNYSSLHA RNNSYPSQIP RSFPDDYVDE DEEEERNDVD 60 LAVNDAEEEE EEELEDEEDE VSAGRGYLRT RNEANNEEDD VDESSESLGK RRRLDRYARG 120 FELVPRSVAS PASKPLQCRN SSADWSEDST FALLDAWGDR YLQNGRKSLR SDEWGEVAKK 180 VSQGSKTPRS EAQCRNRLDT LKKKYKKEKA KHPDYSGLSS KWVYFQKMDE LMLSPPPQPP 240 AARQHSQSPR LSCGIDAGEY VFANSKPYLN HSDGLDEVRD SPSDTASEGE GEDVDDESDG 300 LPPRREKVGD CSESSFKMLA DSIQKFGAIY EKIESSKRQQ IAELEKMRKE FHRDLELQKR 360 QILDRAQAEI SRLRQEDGEG EDDEDGDGDD DDIDVSAENM SG

Sequence ? help Back to Top

Protein Sequence Length: 402 aa Download sequence Send to blast

MEDDARYPPN PYPQINRRPF PSSNYSSLHA RNNSYPSQIP RSFPDDYVDE DEEEERNDVD  60
LAVNDAEEEE EEELEDEEDE VSAGRGYLRT RNEANNEEDD VDESSESLGK RRRLDRYARG  120
FELVPRSVAS PASKPLQCRN SSADWSEDST FALLDAWGDR YLQNGRKSLR SDEWGEVAKK  180
VSQGSKTPRS EAQCRNRLDT LKKKYKKEKA KHPDYSGLSS KWVYFQKMDE LMLSPPPQPP  240
AARQHSQSPR LSCGIDAGEY VFANSKPYLN HSDGLDEVRD SPSDTASEGE GEDVDDESDG  300
LPPRREKVGD CSESSFKMLA DSIQKFGAIY EKIESSKRQQ IAELEKMRKE FHRDLELQKR  360
QILDRAQAEI SRLRQEDGEG EDDEDGDGDD DDIDVSAENM SG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	109	113	KRRRL

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020588097.1	0.0	trihelix transcription factor ASIL1 isoform X3
Refseq	XP_020588098.1	0.0	trihelix transcription factor ASIL1 isoform X3
TrEMBL	A0A2I0X1Q5	0.0	A0A2I0X1Q5_9ASPA; Uncharacterized protein
STRING	XP_008808856.1	1e-111	(Phoenix dactylifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP8090	22	24

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24490.1	2e-64	Trihelix family protein