PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_31459
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family MYB
Protein Properties Length: 229aa    MW: 26189.6 Da    PI: 8.8704
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_31459genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding42.61.4e-13243748
                     HHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  7 eEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     eEd++l+++++ +G g W+  ar  g++Rt+k+c++rw++yl
       PEQU_31459  2 EEDLILINYIAIHGEGVWNNLARSAGLKRTGKSCRLRWLNYL 43
                     9***************************************97 PP

2Myb_DNA-binding461.2e-1449128146
                      TSSS-HHHHHHHHHHHHHTTTT...................................-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg...................................tWktIartmgkgRtlkqcksrwqk 46 
                      rg+ T+eE++l+ d++ ++G++                                   +W++Iar ++ gRt++++k++w++
       PEQU_31459  49 RGNITPEEQLLIMDLHSRWGNRvhpsrdsickmfflkvrrktisdifmaiallqiavRWSKIARQLP-GRTDNEIKNYWRT 128
                      7999***************************************************************.***********96 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129418.952147IPR017930Myb domain
CDDcd001672.19E-9243No hitNo description
SuperFamilySSF466892.9E-18247IPR009057Homeodomain-like
SMARTSM007171.4E-5245IPR001005SANT/Myb domain
PfamPF002491.0E-11243IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.601.2E-18250IPR009057Homeodomain-like
PROSITE profilePS500908.45544130IPR017877Myb-like domain
SMARTSM007179.4E-848132IPR001005SANT/Myb domain
PfamPF002493.9E-1149128IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.601.2E-205169IPR009057Homeodomain-like
SuperFamilySSF466892.9E-18102129IPR009057Homeodomain-like
CDDcd001671.32E-6106128No hitNo description
Gene3DG3DSA:1.10.10.601.2E-20106134IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 229 aa     Download sequence    Send to blast
MEEDLILINY IAIHGEGVWN NLARSAGLKR TGKSCRLRWL NYLRPDVRRG NITPEEQLLI  60
MDLHSRWGNR VHPSRDSICK MFFLKVRRKT ISDIFMAIAL LQIAVRWSKI ARQLPGRTDN  120
EIKNYWRTRI QKKVKDGESV GCSSSPITND EGSSYNNTGL RVGLEEAMGA QPSHPIYPNA  180
NPQEPFFPAY SESNLGGTYL SVEDFWSTQS FNGVHRDSSM NYDACGFDW
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. {ECO:0000305}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKF7694800.0KF769480.1 Phalaenopsis equestris MYB transcription factor 15 (MYB15) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020585163.11e-137myb-related protein 305-like
SwissprotP813919e-60MYB05_ANTMA; Myb-related protein 305
TrEMBLA0A2I0VIW33e-88A0A2I0VIW3_9ASPA; Myb-related protein 305
STRINGXP_008812482.19e-70(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP19838330
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G27810.11e-59myb domain protein 21
Publications ? help Back to Top
  1. Jackson D,Culianez-Macia F,Prescott AG,Roberts K,Martin C
    Expression patterns of myb genes from Antirrhinum flowers.
    Plant Cell, 1991. 3(2): p. 115-25
    [PMID:1840903]