PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_30652
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family bHLH
Protein Properties Length: 302aa    MW: 33362.1 Da    PI: 7.1759
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_30652genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH21.93.1e-071712101054
                 HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                 r +R+++ +a+  L+  lP a     +  + a+iL  +++YIk L
  PEQU_30652 171 RIYRAKVAEAIKALKNALPYA-----ETGNQASILDNVIDYIKFL 210
                 89******************9.....689**************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088811.128161210IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474593.66E-8163229IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000836.48E-7163214No hitNo description
Gene3DG3DSA:4.10.280.102.0E-7163219IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003530.0039167216IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.9E-4171210IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 302 aa     Download sequence    Send to blast
MTISHSVYEN YKSVSIVILQ CADAFGVLFI DRGFDADESN AKALLLMPLR ATTFGEMIDR  60
SASPLVKYNP GVQTTNSSLD AENSNWNYLK RTSFFETGAS TLNHLMPIIN HLDIDALSNL  120
SNSLCPAAKI GGVEYFLPSG LQSKYCSNVA QQSEANMATK IARAPKVLSS RIYRAKVAEA  180
IKALKNALPY AETGNQASIL DNVIDYIKFL KLRLNGKWQV LSQTRLTGEP SAHSFVYIEG  240
FGHYLLHPQT YHQALEEMVG NLLKSNPQVA NELLEYKGLA IAPMDFAYIV PQNSLNPCSS  300
LW
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020580672.11e-129transcription factor bHLH66-like isoform X1
TrEMBLA0A2I0WFP71e-103A0A2I0WFP7_9ASPA; Transcription factor bHLH82
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP2505134
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G30980.18e-15LJRHL1-like 2