PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PEQU_29154

Organism

Phalaenopsis equestris

Taxonomic ID

78828

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis

Family

NAC

Protein Properties

Length: 324aa MW: 36894.6 Da PI: 8.7131

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PEQU_29154	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	167.9	3.3e-52	8	133	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 +ppGfrFhPtd+el+ +yLk+++++++l++ ++i+evdiyk++PwdLp+k+ +e+ewyfFs+rd+ky++g r+nra++sgyWkatg+dk+++ +e+ PEQU_29154 8 MPPGFRFHPTDDELILHYLKNRADASPLPV-SIIAEVDIYKFDPWDLPAKALFGEREWYFFSPRDRKYPNGVRPNRAAASGYWKATGTDKPICF-ADEN 104 79**************************.89***********8877899**********************************9.8899 PP NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128 +g+kk Lvfykg+ pkg ktdW+mheyrl PEQU_29154 105 IGVKKALVFYKGKPPKGLKTDWIMHEYRL 133 *************************98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF101941	2.88E-63	5	165	IPR003441	NAC domain
PROSITE profile	PS51005	59.909	8	165	IPR003441	NAC domain
Pfam	PF02365	1.1E-26	9	133	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 324 aa Download sequence Send to blast
MSNPATQMPP GFRFHPTDDE LILHYLKNRA DASPLPVSII AEVDIYKFDP WDLPAKALFG 60 EREWYFFSPR DRKYPNGVRP NRAAASGYWK ATGTDKPICF ADENIGVKKA LVFYKGKPPK 120 GLKTDWIMHE YRLAESQNSS GCKPVKLGDH SMRLDDWVLC RIYKKRNHLS LPMADQQQEG 180 TSAEDFSFRN PQKQLLHQHH GIKPPKSPFI SALLEDYSPL PLNNLYNQQN LPRFHNNSFI 240 AHSHSNQIII NQRSESSGNA YLHPQLLQQE SAVLFGVKHQ SDSNAEESSG TLQSLKKQNE 300 AIIFPNISDG SQYSSQNLPF FSLQ

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
3ulx_A	2e-75	8	168	15	171	Stress-induced transcription factor NAC1
Search in ModeBase

Functional Description ? help Back to Top
Source	Description
UniProt	Transcription factor that binds DNA motifs 5'-CGT[AG](5N)NACG[ACT][AC][AT][ACG][ACT]-3' and 5'-CACG[ACT][AC][AT][AGT][CT]-3' in target genes promoters. Promotes leaf senescence and reduces fruit yield and sugar content, probably by establishing abscisic acid (ABA) homeostasis. {ECO:0000269\|PubMed:29760199}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: Accumulates during age-dependent and dark-induced leaf senescence. {ECO:0000269\|PubMed:29760199}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020576381.1	0.0	NAC transcription factor 47-like
Swissprot	K4BWV2	3e-88	NAP1_SOLLC; NAC domain-containing protein 1
TrEMBL	A0A2I0VY04	1e-143	A0A2I0VY04_9ASPA; NAC transcription factor 29
STRING	XP_008793367.1	1e-115	(Phoenix dactylifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP1237	36	123

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G61110.1	1e-87	NAC domain containing protein 25

Publications ? help Back to Top
Tomato Genome Consortium The tomato genome sequence provides insights into fleshy fruit evolution. Nature, 2012. 485(7400): p. 635-41 [PMID:22660326] Ma X, et al. The NAC Transcription Factor SlNAP2 Regulates Leaf Senescence and Fruit Yield in Tomato. Plant Physiol., 2018. 177(3): p. 1286-1302 [PMID:29760199]