PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_28725
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family bHLH
Protein Properties Length: 422aa    MW: 45860.4 Da    PI: 6.3255
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_28725genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH27.46.1e-09224271455
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 +h+ +Er RR++i +++  L++l+P +    sk   Ka +L + ++Y++ Lq
  PEQU_28725 224 SHSLAERVRREKISERMKLLQDLVPGC----SKVTGKAVMLDEIINYVQLLQ 271
                 8*************************9....556***************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000833.69E-11218275No hitNo description
SuperFamilySSF474598.64E-17218289IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.472220270IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.104.9E-16220287IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000104.4E-6224271IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003538.1E-10226276IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 422 aa     Download sequence    Send to blast
MRSPDAAGSL PNLNSGHLNL IWDQTMDQSA KFSSAMSSLV SSPSSNPPAA AAAAGGGRGD  60
TPMNSPPKLN LSIIPNPAHM PFSADPGFVE RAARCSTFGY SEGGRHGGGQ FMFPDIGKLG  120
NAQEESTGSG NTKKRKVAMK GKGKEVPLSS SITGVTNPPK KGGVGGTNTK RSKPSEESGV  180
EKESARQEGD DSSEKMEEEK MSKPPEVAKD YIHVRARRGQ ATDSHSLAER VRREKISERM  240
KLLQDLVPGC SKVTGKAVML DEIINYVQLL QRQVEFLSMK LATVNPQLDF NLDNFVTKDM  300
EIHQSCGLLP PQPEYPLEAT SSSFSFTNQP ERTPLISING LELGCQVSPY NPPHLSRNFS  360
MQQPALEGFA DASCQLGTFW DDDLRTVVQM GYSQNQENVF PSQSFQGLHE FKEGKNFNEL  420
DC
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1102108GGRHGGG
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020573116.10.0transcription factor bHLH78-like
TrEMBLA0A2I0X4C50.0A0A2I0X4C5_9ASPA; Transcription factor bHLH62
STRINGGSMUA_Achr6P27780_0011e-115(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP91938137
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G07340.12e-63bHLH family protein