PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_28213
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family ERF
Protein Properties Length: 205aa    MW: 22911.2 Da    PI: 9.3178
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_28213genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.65.4e-172573355
         AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                y+GVr +k +g+Wv+eIr+p   gk++r++lg+f++ae+Aa a++ a++ l+g
  PEQU_28213 25 YRGVRKRK-WGKWVSEIREP---GKKTRIWLGSFDSAEMAATAHDVAALWLRG 73
                9****999.**********8...557*********************998776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.103.6E-312482IPR001471AP2/ERF domain
SuperFamilySSF541711.9E-222482IPR016177DNA-binding domain
PROSITE profilePS5103223.2882481IPR001471AP2/ERF domain
SMARTSM003809.8E-382487IPR001471AP2/ERF domain
PRINTSPR003674.5E-102536IPR001471AP2/ERF domain
PfamPF008475.1E-112573IPR001471AP2/ERF domain
CDDcd000182.27E-292583No hitNo description
PRINTSPR003674.5E-104763IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 205 aa     Download sequence    Send to blast
NQLIRRTQMK LEHDGASASA SAATYRGVRK RKWGKWVSEI REPGKKTRIW LGSFDSAEMA  60
ATAHDVAALW LRGRDARLNF PDTVYDLPRP AGSRPSDIRT AAAEAAQRGP VRFRPEPLRP  120
VRCVQGLWTG DWGLESPGMW RELEEALLLQ PQPAAALGEE GDAGVWGWHR LLNLTAVVLF  180
GFFAFLYWKE LDCGCGCMAN SITKF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A4e-151181172Ethylene-responsive transcription factor ERF096
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00227DAPTransfer from AT1G71450Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020593858.11e-143ethylene-responsive transcription factor ERF022-like
TrEMBLA0A2I0WCL56e-72A0A2I0WCL5_9ASPA; Ethylene-responsive transcription factor ERF021
STRINGXP_008795312.12e-48(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP22443389
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71450.17e-36ERF family protein