PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_28155
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family MYB
Protein Properties Length: 296aa    MW: 33272.2 Da    PI: 7.283
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_28155genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding31.73.5e-103077247
                     SSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  2 grWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqky 47
                     g+WT+ E +l+ +a + +  +   +W ++a++++ g+t ++++ +++++
       PEQU_28155 30 GNWTQHENKLFENALAHFDEDlpdRWVKVAEMIP-GKTVEDVVAHYRDL 77
                     89********************************.***********986 PP
2Myb_DNA-binding461.2e-14137181347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+++++ + k++G+g+W+ I+r +  +Rt+ q+ s+ qky
       PEQU_28155 137 PWTEEEHKRFLIGLKKYGKGDWRNISRNFVVTRTPTQVASHAQKY 181
                      7*******************************************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.603.4E-42677IPR009057Homeodomain-like
PROSITE profilePS5129310.6952782IPR017884SANT domain
SMARTSM007171.4E-82880IPR001005SANT/Myb domain
PfamPF002494.8E-83077IPR001005SANT/Myb domain
SuperFamilySSF466891.5E-113085IPR009057Homeodomain-like
CDDcd001674.37E-73177No hitNo description
PROSITE profilePS5129419.816130186IPR017930Myb domain
SuperFamilySSF466891.35E-17132186IPR009057Homeodomain-like
TIGRFAMsTIGR015571.5E-17133184IPR006447Myb domain, plants
SMARTSM007171.9E-10134184IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.609.6E-12135180IPR009057Homeodomain-like
PfamPF002495.8E-12137181IPR001005SANT/Myb domain
CDDcd001671.51E-9137182No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 296 aa     Download sequence    Send to blast
MMTNSWMEVI SPYPAYLSNS NWILGEKKSG NWTQHENKLF ENALAHFDED LPDRWVKVAE  60
MIPGKTVEDV VAHYRDLEDD VNCIEAGLIP FPGYSSSSFT LDWENDHGFD ELRHACCVGG  120
KRLGGRLAEH ERKKGIPWTE EEHKRFLIGL KKYGKGDWRN ISRNFVVTRT PTQVASHAQK  180
YFIRLNSGTK EKRRASIHDI KTVSLEDSRS PSPSQPSVSS IQSSSSSAPA TSEQFSMVVD  240
SKLPNEVATV FSPSSNGNQF IQSSYGIFPY GMKRQPQSTF QCNLNGAIPG QNGVFF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2cjj_A2e-1532971176RADIALIS
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtInvolved in the dorsovental asymmetry of flowers. Promotes ventral identity. {ECO:0000269|PubMed:11937495, ECO:0000269|PubMed:9118809}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020588515.10.0transcription factor DIVARICATA-like
RefseqXP_020588516.10.0transcription factor DIVARICATA-like
SwissprotQ8S9H71e-94DIV_ANTMA; Transcription factor DIVARICATA
TrEMBLA0A2I0WN730.0A0A2I0WN73_9ASPA; Transcription factor DIVARICATA
STRINGXP_008785419.11e-136(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP22743796
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38090.15e-91MYB family protein
Publications ? help Back to Top
  1. Galego L,Almeida J
    Role of DIVARICATA in the control of dorsoventral asymmetry in Antirrhinum flowers.
    Genes Dev., 2002. 16(7): p. 880-91
    [PMID:11937495]
  2. Almeida J,Rocheta M,Galego L
    Genetic control of flower shape in Antirrhinum majus.
    Development, 1997. 124(7): p. 1387-92
    [PMID:9118809]