PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PEQU_27822

Organism

Phalaenopsis equestris

Taxonomic ID

78828

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis

Family

WRKY

Protein Properties

Length: 82aa MW: 9822.13 Da PI: 9.0182

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PEQU_27822	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	78.6	7.1e-25	1	58	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 dD+y+W+KYGqK +kg + rsY++C ++C +kkkve ++dp+ +ei YegeHnh+ PEQU_27822 1 DDEYEWKKYGQKYIKGIKKYRSYFKCKNKNCGAKKKVEWPTNDPNNIEILYEGEHNHR 58 7********************************************************6 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF118290	5.36E-22	1	58	IPR003657	WRKY domain
PROSITE profile	PS50811	22.068	1	60	IPR003657	WRKY domain
SMART	SM00774	2.8E-20	1	59	IPR003657	WRKY domain
Gene3D	G3DSA:2.20.25.80	2.7E-23	1	58	IPR003657	WRKY domain
Pfam	PF03106	3.6E-22	1	58	IPR003657	WRKY domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 82 aa Download sequence Send to blast
DDEYEWKKYG QKYIKGIKKY RSYFKCKNKN CGAKKKVEWP TNDPNNIEIL YEGEHNHRVI 60 IALELEEANK YDLATQMFGS RT

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
1wj2_A	7e-16	1	57	18	74	Probable WRKY transcription factor 4
2lex_A	7e-16	1	57	18	74	Probable WRKY transcription factor 4
Search in ModeBase

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020595991.1	1e-34	probable WRKY transcription factor 26 isoform X1
TrEMBL	A0A2I0VZV9	3e-29	A0A2I0VZV9_9ASPA; Putative WRKY transcription factor 3
STRING	OS03T0657400-00	2e-23	(Oryza sativa)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP10158	34	44