PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_26133
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family bHLH
Protein Properties Length: 561aa    MW: 64775 Da    PI: 4.6806
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_26133genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH42.61.1e-13351397455
                 HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                 +h   ErrRR+++N++f +Lr+l+P+ +      K++Ka++L  ++eY+k+L+
  PEQU_26133 351 NHVLSERRRREKLNEKFVTLRSLVPSiS------KVDKASVLADTIEYLKDLE 397
                 79999*********************66......****************996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF142152.5E-3516165IPR025610Transcription factor MYC/MYB N-terminal
PROSITE profilePS5088817.123347396IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474593.53E-18348414IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.108.9E-19350412IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000837.68E-14350401No hitNo description
PfamPF000101.8E-11351397IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.4E-16353402IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 561 aa     Download sequence    Send to blast
MCARYVNFPF FVVPRSLEWN DGYYNGDIKT RKTTQQTECR VDEMGLQRTE QLRELYESLC  60
NGDCNQQTRP SASLSPEDLT DKEWYYLVCM SFTFNFGQDL PGKAYELNES IWLNNAHFAE  120
NSCFCRSLLA KTVVCLPFMD GVLELGTTEL VMEEPGFLLN ITSSFWELQL PGFSEHSTSS  180
SPLERKEEED DVCLISNHEV QGTIMSENPA LIIEDDSHLF PFSVDSYAPD INSDLIHYKE  240
IIGINIPNEP SQVHIRHLMA DDSLSAILGD LEQGRSSPGF PFQNRHIDSS FRVWEEGSKS  300
SKIFIRFPQR MLKKILFGRN WINGDEWVKS HEENVPRNKA FKSEADDANS NHVLSERRRR  360
EKLNEKFVTL RSLVPSISKV DKASVLADTI EYLKDLEKRV EELEFCREER DTDMREPRKH  420
PDITERTSDN YGNNEFIISQ KSSSNKRKAC EMDDSDAQLN LILSNNGLFD INVTMIDREV  480
LIELHCPWRD FLLLDIIEAL CNLRLDPHSV RSSTPDPTTV IALRAKVCNN YIQEDLQTYL  540
LIPMYLHLQH LNFNFFIGNV A
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4rqw_A8e-111716547192Transcription factor MYC3
4rqw_B8e-111716547192Transcription factor MYC3
4rs9_A8e-111716547192Transcription factor MYC3
4yz6_A8e-111716547192Transcription factor MYC3
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1355360ERRRRE
2356361RRRREK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020592379.10.0anthocyanin regulatory R-S protein-like
TrEMBLA0A2H9ZY710.0A0A2H9ZY71_9ASPA; Transcription factor EGL1
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP93233109
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G63650.31e-99bHLH family protein