PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PEQU_22489 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
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Family | NAC | ||||||||
Protein Properties | Length: 300aa MW: 34126.4 Da PI: 5.4935 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 168.7 | 1.9e-52 | 13 | 140 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kge 98 lppGfrFhPtdeelvv+yL++k+++++l++ +i+evd+yk++Pw+Lp+k+ ++kewyfF++rd+ky++g+r+nra+ +gyWkatg dk+vl k ++ PEQU_22489 13 LPPGFRFHPTDEELVVHYLCRKAAHQRLPV-PIIAEVDLYKFDPWELPEKALFGQKEWYFFTPRDRKYPNGSRPNRAAGQGYWKATGADKPVLPKgINR 110 79****************************.88***************8888899**************************************985566 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128 g+kk Lvfy+g+ap+g ktdW+mheyrl PEQU_22489 111 PLGIKKALVFYSGKAPRGAKTDWIMHEYRL 140 7***************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 4.45E-63 | 9 | 166 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 60.647 | 13 | 166 | IPR003441 | NAC domain |
Pfam | PF02365 | 5.6E-27 | 14 | 140 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 300 aa Download sequence Send to blast |
MGRRRDAEAE LNLPPGFRFH PTDEELVVHY LCRKAAHQRL PVPIIAEVDL YKFDPWELPE 60 KALFGQKEWY FFTPRDRKYP NGSRPNRAAG QGYWKATGAD KPVLPKGINR PLGIKKALVF 120 YSGKAPRGAK TDWIMHEYRL AETNRSANKK GSLRLDEWVL CRLYNKKNAW EKMQQNVMES 180 PSFEETMDSM GAVEDTGSES FRTPESDVDD SLPEFDDLGL PGLRTASGSA FSFKGTEQRP 240 KEEDNHDWFL DLNLDELDAV GTGSATMTMG TFDLSLNQDY FYQALCSPQL KPSLTNLAPF |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 1e-98 | 1 | 172 | 3 | 174 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor involved in stress response. {ECO:0000250|UniProtKB:Q7F2L3}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Induced by salt stress (PubMed:18813954, PubMed:20632034). Induced by dehydration, cold stress and methyl jasmonate (PubMed:20632034). {ECO:0000269|PubMed:18813954, ECO:0000269|PubMed:20632034}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020578930.1 | 0.0 | NAC domain-containing protein 68-like | ||||
Swissprot | Q52QH4 | 1e-114 | NAC68_ORYSJ; NAC domain-containing protein 68 | ||||
TrEMBL | A0A2I0W110 | 0.0 | A0A2I0W110_9ASPA; NAC domain-containing protein 68 | ||||
STRING | GSMUA_Achr7P21780_001 | 1e-145 | (Musa acuminata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP5389 | 37 | 61 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G01720.1 | 6e-91 | NAC family protein |