PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_21566
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family MYB_related
Protein Properties Length: 265aa    MW: 30666.2 Da    PI: 9.5355
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_21566genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding28.34.2e-09169197230
                      SSS-HHHHHHHHHHHHHTTTT-HHHHHHH CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIart 30 
                       +WT+eE+  l+ avk++G g+W  I ++
       PEQU_21566 169 HPWTAEEENDLIAAVKKHGEGNWLNILKE 197
                      69*********************999875 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129415.602162220IPR017930Myb domain
Gene3DG3DSA:1.10.10.601.2E-13164220IPR009057Homeodomain-like
SuperFamilySSF466898.61E-13166223IPR009057Homeodomain-like
SMARTSM007176.7E-10167218IPR001005SANT/Myb domain
CDDcd116605.84E-12169217No hitNo description
PfamPF139215.3E-7171223No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 265 aa     Download sequence    Send to blast
MVDKGKRPLQ IQLKRPQQTC QCLQKHTQQP SQHVVNKLPF TIRERLNKEY SFKKEAVEQI  60
FRDLVKKPEF KLPELKKPDE IDKRDHPQYY PCRRLEDDSD LEFELEAVPP VSAEALLQAI  120
ECFEVIMASG MTPKAHLSDV HISKASHSKE QALTPDYSET LRPRKRKRHP WTAEEENDLI  180
AAVKKHGEGN WLNILKEDFK YDRNPSQLSQ RWNIIKKRLA SSNCASDDKM NSWVMQNKQL  240
ATRKAISMAL NIPMIGSLST PQAGN
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020588578.11e-120telomere repeat-binding factor 4-like isoform X1
RefseqXP_020588579.11e-121uncharacterized protein LOC110030282 isoform X2
TrEMBLA0A2I0X6W04e-70A0A2I0X6W0_9ASPA; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP46843754
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G58220.11e-20MYB_related family protein