PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PEQU_21534 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
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Family | bHLH | ||||||||
Protein Properties | Length: 138aa MW: 14529.8 Da PI: 12.1283 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 12 | 0.0004 | 79 | 100 | 26 | 52 |
TSCCC...TTS-STCHHHHHHHHHHHH CS HLH 26 llPkaskapskKlsKaeiLekAveYIk 52 l+P + +Kls +++Le+A +YI PEQU_21534 79 LVPGC-----RKLSLSSVLEEAADYIA 100 55555.....9***************6 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:4.10.280.10 | 7.8E-6 | 72 | 112 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 6.15E-6 | 72 | 117 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 138 aa Download sequence Send to blast |
MKPNGRSIRE AADRALAVTA GGRTRWSKAI LSGGRSTLRK NRRIRPAGVG ERRSKLFGAG 60 RRGGTIPAVE RKVKFLGRLV PGCRKLSLSS VLEEAADYIA AVEMQVRAMT SLAEKLSGFA 120 GVPVANAAES ASGSPIPS |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Atypical bHLH transcription factor probably unable to bind DNA. Negatively regulates brassinosteroid signaling. {ECO:0000269|PubMed:20023194}. | |||||
UniProt | bHLH transcription factor that binds DNA on specific sequence 5'-CANNTG-3' in target gene promoters (PubMed:24009530). Negatively regulates brassinosteroid signaling (PubMed:20023194). Together with BHLH148/RITF1, regulates the transcription of several genes involved in the detoxification of reactive oxygen species (ROS) generated by salt (NaCl) stress. Confers tolerance to salt and to the oxidative stress-inducing reagents hydrogen peroxide H(2)O(2) and methyl viologen (MV) (PubMed:24009530). {ECO:0000269|PubMed:20023194, ECO:0000269|PubMed:24009530}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Slightly induced by salt (NaCl) stress. {ECO:0000269|PubMed:24009530}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020596509.1 | 1e-91 | transcription factor bHLH149-like | ||||
Swissprot | Q9C8Z9 | 3e-27 | BH148_ARATH; Transcription factor bHLH148 | ||||
Swissprot | Q9LSN7 | 3e-27 | BH147_ARATH; Transcription factor bHLH147 | ||||
TrEMBL | A0A1R3IUN0 | 5e-32 | A0A1R3IUN0_COCAP; Uncharacterized protein | ||||
TrEMBL | A0A1U8ABZ8 | 6e-32 | A0A1U8ABZ8_NELNU; transcription factor bHLH147 | ||||
STRING | XP_010259237.1 | 9e-33 | (Nelumbo nucifera) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP1658 | 5 | 8 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G06590.2 | 1e-29 | bHLH family protein |
Publications ? help Back to Top | |||
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