PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_21184
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family MYB_related
Protein Properties Length: 289aa    MW: 30818.6 Da    PI: 7.9184
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_21184genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding39.99.9e-13115159347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+ l++ +  ++G+g+W++I+r +   Rt+ q+ s+ qky
       PEQU_21184 115 AWTEEEHRLFLLGLDKYGKGDWRSISRNFVISRTPTQVASHAQKY 159
                      6*****************************99************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS512949.172156IPR017930Myb domain
SMARTSM007170.0057254IPR001005SANT/Myb domain
SuperFamilySSF466892.21E-9560IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.4E-4650IPR009057Homeodomain-like
CDDcd001671.41E-7648No hitNo description
PROSITE profilePS5129418.029108164IPR017930Myb domain
SuperFamilySSF466891.12E-16110165IPR009057Homeodomain-like
TIGRFAMsTIGR015574.7E-17112162IPR006447Myb domain, plants
SMARTSM007171.6E-10112162IPR001005SANT/Myb domain
PfamPF002493.5E-11115159IPR001005SANT/Myb domain
CDDcd001675.17E-10115160No hitNo description
Gene3DG3DSA:1.10.10.605.5E-11115158IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 289 aa     Download sequence    Send to blast
MVAEIWTWEE EKAFENALAI HHETCSDWWE KIVSAVPGKT SEEIKTHYEI LVEDVQSIDS  60
GLVPLPTYAT PSSSSAAEGS GDGGGNVKKG GDFHGDSSHG GKGSRLDHER RKGIAWTEEE  120
HRLFLLGLDK YGKGDWRSIS RNFVISRTPT QVASHAQKYF IRLNSMNKDR RRSSIHDITN  180
VSNGDLSASQ GPITGQVNNI SSPISSKAIK QPSHTAASAP GIAVYGSAVG RPLGGPLMPA  240
IGTPVAGPPS MVYGIQPPPV PGLVVAAGAP VHLAPTMAYP MRNSSASHR
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2cjj_A2e-176701175RADIALIS
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that coordinates abscisic acid (ABA) biosynthesis and signaling-related genes via binding to the specific promoter motif 5'-(A/T)AACCAT-3'. Represses ABA-mediated salt (e.g. NaCl and KCl) stress tolerance. Regulates leaf shape and promotes vegetative growth. {ECO:0000269|PubMed:26243618}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by salicylic acid (SA) and gibberellic acid (GA) (PubMed:16463103). Triggered by dehydration and salt stress (PubMed:26243618). {ECO:0000269|PubMed:16463103, ECO:0000269|PubMed:26243618}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020573068.10.0transcription factor SRM1-like
SwissprotQ9FNN66e-97SRM1_ARATH; Transcription factor SRM1
TrEMBLA0A482DJG51e-179A0A482DJG5_9ASPA; RR-type MYB transcription factor 3 (Fragment)
STRINGGLYMA07G28310.11e-118(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP63763854
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G08520.11e-84MYB family protein
Publications ? help Back to Top
  1. Wang T, et al.
    Salt-Related MYB1 Coordinates Abscisic Acid Biosynthesis and Signaling during Salt Stress in Arabidopsis.
    Plant Physiol., 2015. 169(2): p. 1027-41
    [PMID:26243618]
  2. Chen YS, et al.
    Two MYB-related transcription factors play opposite roles in sugar signaling in Arabidopsis.
    Plant Mol. Biol., 2017. 93(3): p. 299-311
    [PMID:27866313]