PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PEQU_21136 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
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Family | TALE | ||||||||
Protein Properties | Length: 250aa MW: 29072.6 Da PI: 10.3471 | ||||||||
Description | TALE family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 25.9 | 1.7e-08 | 204 | 236 | 22 | 54 |
SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 22 nrypsaeereeLAkklgLterqVkvWFqNrRak 54 ++yps ++ LA++ gLt +qV++WF N R + PEQU_21136 204 HPYPSDVDKHILARQSGLTRNQVTNWFINARVR 236 89*****************************98 PP | |||||||
2 | BELL | 102.4 | 3.3e-33 | 60 | 128 | 4 | 72 |
BELL 4 elqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 +lqk++a Ll++lee+d+rY++y+eq+ tv+ssFeavag g+a++Y +lA+ka+SrhFrcL+d i++q+ PEQU_21136 60 QLQKRQAALLTMLEELDRRYRRYREQMATVASSFEAVAGEGAATVYLALASKAMSRHFRCLRDGIVGQM 128 689***************************************************************995 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00574 | 1.1E-33 | 1 | 126 | IPR006563 | POX domain |
Pfam | PF07526 | 1.1E-37 | 2 | 124 | IPR006563 | POX domain |
PROSITE profile | PS50071 | 11.823 | 177 | 240 | IPR001356 | Homeobox domain |
CDD | cd00086 | 8.82E-9 | 180 | 241 | No hit | No description |
SMART | SM00389 | 1.1E-7 | 180 | 244 | IPR001356 | Homeobox domain |
SuperFamily | SSF46689 | 1.75E-16 | 181 | 246 | IPR009057 | Homeodomain-like |
Gene3D | G3DSA:1.10.10.60 | 1.5E-26 | 183 | 245 | IPR009057 | Homeodomain-like |
Pfam | PF05920 | 5.7E-17 | 197 | 236 | IPR008422 | Homeobox KN domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 250 aa Download sequence Send to blast |
KLKLSKYFFP ARELLSEFCD LGGFMRNSKQ KTEIGRLREG ETASASSLLD HSMSSLNVLQ 60 LQKRQAALLT MLEELDRRYR RYREQMATVA SSFEAVAGEG AATVYLALAS KAMSRHFRCL 120 RDGIVGQMKA MRKAVAGLEP TTEPGISRGE TPRLKLIDHY WLREKRVFQQ RDIFMDQQPW 180 RPQRGLPERS VSVLRAWLFD HFLHPYPSDV DKHILARQSG LTRNQVTNWF INARVRLWKP 240 MIEEIYLEEI |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3k2a_A | 5e-16 | 186 | 244 | 5 | 63 | Homeobox protein Meis2 |
3k2a_B | 5e-16 | 186 | 244 | 5 | 63 | Homeobox protein Meis2 |
4xrm_A | 5e-16 | 186 | 244 | 5 | 63 | Homeobox protein Meis2 |
4xrm_B | 5e-16 | 186 | 244 | 5 | 63 | Homeobox protein Meis2 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Plays a major role in ovule patterning and in determination of integument identity via its interaction with MADS-box factors. Formation of complex with AG-SEP dimers negatively regulates the carpel identity process and favors the maintenance of ovule identity. BEL1-STM complex maintains the indeterminacy of the inflorescence meristem. Required, with SPL, for cytokinin-induced PIN1 expression in ovules (PubMed:22786869). {ECO:0000269|PubMed:12244239, ECO:0000269|PubMed:17693535, ECO:0000269|PubMed:22786869}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020573319.1 | 0.0 | homeobox protein BEL1 homolog | ||||
Swissprot | Q38897 | 5e-84 | BEL1_ARATH; Homeobox protein BEL1 homolog | ||||
TrEMBL | A0A2I0X817 | 1e-107 | A0A2I0X817_9ASPA; Homeobox protein BEL1 like | ||||
STRING | XP_008796900.1 | 1e-106 | (Phoenix dactylifera) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP6398 | 35 | 47 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G36870.2 | 8e-79 | BEL1-like homeodomain 2 |
Publications ? help Back to Top | |||
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