PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_20559
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family Trihelix
Protein Properties Length: 438aa    MW: 50014.5 Da    PI: 7.1043
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_20559genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix71.61.4e-22127223185
    trihelix   1 rWtkqevlaLiearremeerlrrgk...........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr.tsessstcpyfdql 85 
                 +Wt+ +v++Li+a+++++e+  +++           +kk++W+ +sk+++ergf +sp+qC++k+++lnkryk+++++ +++ +++++++ +++d +
  PEQU_20559 127 KWTDLMVRLLITAVSYLGEDALSECtssgrrkaslvQKKGKWKLISKVLAERGFYVSPQQCEDKFNDLNKRYKRLTDILGRGtSCKVVENPALLDLM 223
                 7**************999888877666778888999**********************************************569999999888877 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138375.7E-21125250No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 438 aa     Download sequence    Send to blast
MDANLASGNM IPGASYGVID LQGSMHMHHH QNPNASFHHH LQQSGHCQRQ GSLMHPPMHD  60
VFPLQINHMK DCDQQLVQPM MDYDKKGECC KNSASDDDEL SLNTDDGVLC QNEAGKGNKG  120
SPWQRMKWTD LMVRLLITAV SYLGEDALSE CTSSGRRKAS LVQKKGKWKL ISKVLAERGF  180
YVSPQQCEDK FNDLNKRYKR LTDILGRGTS CKVVENPALL DLMSHIPDKA KDDVRKILSS  240
KHLFYEEMCS YHNGNRLNLP ANPALKRSLQ LAMMSKDDHE TKRGVNDELD VANHGDSEDG  300
EEDPEDNHRD IGGSCFHKRV KHGEEMSFTN SLGSQDFNRR TDPMAAHTDA SYALPEGPKA  360
AWLQMEMLRS RSIQLEEQSL HIQSQMLELE QQRLKWQRFS KKKDKELDKM RMENERIKLG  420
NERLSLDLKH KQLERGLN
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020583172.10.0uncharacterized protein LOC110026543
TrEMBLA0A2I0W3S00.0A0A2I0W3S0_9ASPA; Uncharacterized protein
STRINGXP_008781412.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP29203886
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G21200.11e-130sequence-specific DNA binding transcription factors