PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_19567
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family HD-ZIP
Protein Properties Length: 272aa    MW: 30970.8 Da    PI: 5.4598
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_19567genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox56.44.9e-1882134456
                 -SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
    Homeobox   4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                 + +++ eq+++Le+ Fe  +++  e+r +LA+ lgL+ rq+ +WFqNrRa++k
  PEQU_19567  82 KKRLNLEQVRALEKNFELGNKLEPERRIQLARTLGLQPRQIAIWFQNRRARWK 134
                 4568889*********************************************9 PP
2HD-ZIP_I/II122.91.6e-3980171192
  HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 
                  ekk+rl+ eqv++LE++Fe  +kLeper+ +lar+Lglqprq+a+WFqnrRAR+ktkqlEkdy+ Lkr++d +k++n++L+ ++++L++e+ 
   PEQU_19567  80 EKKKRLNLEQVRALEKNFELGNKLEPERRIQLARTLGLQPRQIAIWFQNRRARWKTKQLEKDYDLLKRKFDVVKADNDSLQFQNKKLQSEIL 171
                  69**************************************************************************************9985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466898.98E-2069138IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.605.1E-1969136IPR009057Homeodomain-like
PROSITE profilePS5007117.4176136IPR001356Homeobox domain
SMARTSM003893.7E-1779140IPR001356Homeobox domain
CDDcd000862.92E-1681137No hitNo description
PfamPF000462.2E-1582134IPR001356Homeobox domain
PRINTSPR000311.1E-5107116IPR000047Helix-turn-helix motif
PROSITE patternPS000270111134IPR017970Homeobox, conserved site
PRINTSPR000311.1E-5116132IPR000047Helix-turn-helix motif
PfamPF021831.7E-13136175IPR003106Leucine zipper, homeobox-associated
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 272 aa     Download sequence    Send to blast
MASFSSGIPS SPFFQPNLFL SIDEEQIPSM NSINALFPSS NPNTLTRGMV GIMERRPSAS  60
FSGNVEGEEE LSDESSQPGE KKKRLNLEQV RALEKNFELG NKLEPERRIQ LARTLGLQPR  120
QIAIWFQNRR ARWKTKQLEK DYDLLKRKFD VVKADNDSLQ FQNKKLQSEI LKLKGSEVMN  180
LNKETEGCCS NRSDCCAEIN LDISGTFAEQ LNPDMHSISL FPVIRQLPPA ISGQFLHGAS  240
RPEFSEESFG NFVCGVEEQN SFWAWDDHHN FH
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1128136RRARWKTKQ
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor. {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020588437.10.0homeobox-leucine zipper protein HOX21-like isoform X2
SwissprotQ8S7W91e-76HOX21_ORYSJ; Homeobox-leucine zipper protein HOX21
TrEMBLA0A2I0W8941e-127A0A2I0W894_9ASPA; Homeobox-leucine zipper protein ATHB-13
STRINGXP_008797128.11e-94(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP22893894
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69780.11e-69HD-ZIP family protein