PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PEQU_18967 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
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Family | NAC | ||||||||
Protein Properties | Length: 212aa MW: 23927.1 Da PI: 10.0612 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 132.5 | 3e-41 | 9 | 139 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk.....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 pGfrF Pt+eel+++yL++k+++ + ++e+vi+ ++++++ePw+Lp+ ++ +++++w+fF++++++++ g r++r+t+sgyWk+tg++ +++s+ PEQU_18967 9 LPGFRFYPTEEELLSFYLRNKLNNLRGDMERVIPVLNVFSLEPWQLPElsgepCL-QDKEQWFFFCPQQERESAGGRPRRITASGYWKTTGSSVAIYSS 106 59***************************99****************64565433.3677*************************************** PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrl 128 +++ g+kkt++fy+gr +++kt+W m++y l PEQU_18967 107 TQRRLGMKKTMAFYNGRPLRSQKTKWKMNQYLL 139 *******************************75 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 1.7E-44 | 4 | 169 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 43.705 | 8 | 171 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.8E-22 | 10 | 138 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 212 aa Download sequence Send to blast |
EALISMNSLP GFRFYPTEEE LLSFYLRNKL NNLRGDMERV IPVLNVFSLE PWQLPELSGE 60 PCLQDKEQWF FFCPQQERES AGGRPRRITA SGYWKTTGSS VAIYSSTQRR LGMKKTMAFY 120 NGRPLRSQKT KWKMNQYLLF DDRPTTTTST VVPGETPKLR AEFSLCRLYT GSGSLRSFDR 180 RPAAAGEEAS TSEVRLSEGG ASSGSGKKPR VG |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1ut4_A | 1e-26 | 1 | 174 | 10 | 168 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 1e-26 | 1 | 174 | 10 | 168 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 1e-26 | 1 | 174 | 10 | 168 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 1e-26 | 1 | 174 | 10 | 168 | NO APICAL MERISTEM PROTEIN |
3swm_A | 1e-26 | 1 | 174 | 13 | 171 | NAC domain-containing protein 19 |
3swm_B | 1e-26 | 1 | 174 | 13 | 171 | NAC domain-containing protein 19 |
3swm_C | 1e-26 | 1 | 174 | 13 | 171 | NAC domain-containing protein 19 |
3swm_D | 1e-26 | 1 | 174 | 13 | 171 | NAC domain-containing protein 19 |
3swp_A | 1e-26 | 1 | 174 | 13 | 171 | NAC domain-containing protein 19 |
3swp_B | 1e-26 | 1 | 174 | 13 | 171 | NAC domain-containing protein 19 |
3swp_C | 1e-26 | 1 | 174 | 13 | 171 | NAC domain-containing protein 19 |
3swp_D | 1e-26 | 1 | 174 | 13 | 171 | NAC domain-containing protein 19 |
4dul_A | 1e-26 | 1 | 174 | 10 | 168 | NAC domain-containing protein 19 |
4dul_B | 1e-26 | 1 | 174 | 10 | 168 | NAC domain-containing protein 19 |
Search in ModeBase |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020577064.1 | 1e-151 | NAC domain-containing protein 90-like | ||||
Swissprot | Q9FMR3 | 2e-65 | NAC90_ARATH; NAC domain-containing protein 90 | ||||
TrEMBL | A0A2I0WT46 | 1e-104 | A0A2I0WT46_9ASPA; NAC domain-containing protein 90 | ||||
STRING | XP_008794217.1 | 3e-77 | (Phoenix dactylifera) | ||||
STRING | XP_008806117.1 | 3e-77 | (Phoenix dactylifera) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP1005 | 38 | 140 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G22380.1 | 3e-64 | NAC domain containing protein 90 |
Publications ? help Back to Top | |||
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