PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PEQU_18957

Organism

Phalaenopsis equestris

Taxonomic ID

78828

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis

Family

Trihelix

Protein Properties

Length: 341aa MW: 39480.5 Da PI: 6.5324

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PEQU_18957	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	91.1	1.2e-28	72	157	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW+kqe+l+L+e+r +++ ++r++ +k+plW+ev++ m +e+g++rs k+C+ek+enl k+ykk+ke +++r++++ ++++f+qlea PEQU_18957 72 RWPKQETLTLLEIRARLDPQFREAGQKAPLWDEVARIMtEEHGYQRSGKKCREKLENLYKYYKKTKEDKIGRHEGK--HYRFFQQLEA 157 8***********************************999**************************86555..5*****85 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50090	6.748	65	130	IPR017877	Myb-like domain
Pfam	PF13837	6.6E-19	71	158	No hit	No description
CDD	cd12203	2.66E-19	71	137	No hit	No description

Sequence ? help Back to Top
Protein Sequence Length: 341 aa Download sequence Send to blast
MESEDQYFHL LPELRQLMLL SSKPPVFSGA ASDHLYSIPP QLRSPPPPPP PPLQHPSPIS 60 ANNGGIRSSQ SRWPKQETLT LLEIRARLDP QFREAGQKAP LWDEVARIMT EEHGYQRSGK 120 KCREKLENLY KYYKKTKEDK IGRHEGKHYR FFQQLEALYS PSSTNISTAT TTAAAAATIK 180 SSNTSNTKKL NLIENMNAFI FSTSSESSDE EEEEEDETLV VDRNSYIRTK TWIEVLIESQ 240 VKKMLMMQEA WFEKMMRSFE RMEHERLRRE DAWRQEEAAR HEREQRRLAS ERAWAKAREA 300 SLIMTLEKII QQRESMGPTM IGGGEESEEM QCDQSRNIGA L

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020577081.1	0.0	trihelix transcription factor PTL-like
TrEMBL	A0A2I0VMJ3	1e-130	A0A2I0VMJ3_9ASPA; Trihelix transcription factor PTL
STRING	VIT_08s0007g03820.t01	2e-73	(Vitis vinifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP22922	6	6

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03680.1	1e-38	Trihelix family protein