PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_17473
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family ERF
Protein Properties Length: 121aa    MW: 13841.2 Da    PI: 4.5826
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_17473genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.61e-201870156
         AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56
                ++y+GVr+++ +g+++AeIrd s    + +r++lg+f taeeAa+a+++a+ +++ge
  PEQU_17473 18 TRYRGVRRRP-WGKFAAEIRDSSR---QgARVWLGTFNTAEEAARAYDRAAYSMRGE 70
                68********.**********422...24**************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000188.91E-211878No hitNo description
PfamPF008474.8E-161870IPR001471AP2/ERF domain
SMARTSM003802.5E-331985IPR001471AP2/ERF domain
SuperFamilySSF541711.57E-241979IPR016177DNA-binding domain
PROSITE profilePS5103223.8021977IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.1E-311978IPR001471AP2/ERF domain
PRINTSPR003677.7E-122031IPR001471AP2/ERF domain
PRINTSPR003677.7E-124359IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010200Biological Processresponse to chitin
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 121 aa     Download sequence    Send to blast
IHNSNPMEKK DEGESKETRY RGVRRRPWGK FAAEIRDSSR QGARVWLGTF NTAEEAARAY  60
DRAAYSMRGE FAVLNFPDEL HLYANDASGS SSETKKEVIE FECLDDKVLE DMLDSGEEDK  120
E
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A3e-331510810114Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020581086.12e-79ethylene-responsive transcription factor ERF098-like
SwissprotQ9LTC53e-41ERF98_ARATH; Ethylene-responsive transcription factor ERF098
TrEMBLA0A2I0WQ411e-47A0A2I0WQ41_9ASPA; Ethylene-responsive transcription factor ERF098
STRINGEMT264972e-46(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP10337465
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23230.14e-33ERF family protein
Publications ? help Back to Top
  1. Van den Broeck L, et al.
    From network to phenotype: the dynamic wiring of an Arabidopsis transcriptional network induced by osmotic stress.
    Mol. Syst. Biol., 2017. 13(12): p. 961
    [PMID:29269383]