PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_17171
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family NAC
Protein Properties Length: 278aa    MW: 31649.8 Da    PI: 7.4945
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_17171genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM150.57.9e-47171361128
         NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 
                 lppGfrFhPtdeel+v+yL++++++++l++  +i+e+d+yk++PwdLp k+  +++ewyfF++rd+ky++g+r+nra+ +gyWkatg        +++ 
  PEQU_17171  17 LPPGFRFHPTDEELLVHYLCRRASHQPLPV-PIIAELDLYKYNPWDLPDKALFGTREWYFFTPRDRKYPNGSRPNRAAGRGYWKATGA-------NSRP 107
                 79****************************.88***************77778999*******************************9.......5689 PP

         NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128
                 +g+kk Lvfy+g+ pkg ktdW+mheyrl
  PEQU_17171 108 IGIKKALVFYDGKPPKGAKTDWIMHEYRL 136
                 9**************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019413.66E-5913162IPR003441NAC domain
PROSITE profilePS5100550.70817162IPR003441NAC domain
PfamPF023651.0E-2518136IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 278 aa     Download sequence    Send to blast
MGGGGRRLRD AEAELNLPPG FRFHPTDEEL LVHYLCRRAS HQPLPVPIIA ELDLYKYNPW  60
DLPDKALFGT REWYFFTPRD RKYPNGSRPN RAAGRGYWKA TGANSRPIGI KKALVFYDGK  120
PPKGAKTDWI MHEYRLVDAN RSARRNGSLR LDDWVLCRLY NKKKGWEKRP KEEMDLMEES  180
FRTPESDIEL PDFDNFGQER MDMNPSSGAA QIPAAAPMPA PVIKEEYDWY SDLNLEDLQN  240
SFGPFASTAP AAFNVSTQDC YVLSLVSPKS VAANVPSF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A2e-8641682174Stress-induced transcription factor NAC1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor involved in stress response. {ECO:0000250|UniProtKB:Q7F2L3}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by salt stress (PubMed:18813954, PubMed:20632034). Induced by dehydration, cold stress and methyl jasmonate (PubMed:20632034). {ECO:0000269|PubMed:18813954, ECO:0000269|PubMed:20632034}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020597726.10.0LOW QUALITY PROTEIN: NAC domain-containing protein 68-like
SwissprotQ52QH43e-97NAC68_ORYSJ; NAC domain-containing protein 68
TrEMBLA0A2R4RN730.0A0A2R4RN73_9ASPA; NAC1
STRINGXP_008782755.11e-115(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP53893761
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G77450.12e-87NAC domain containing protein 32
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]
  2. Taga Y, et al.
    Role of OsHSP90 and IREN, Ca2+ dependent nuclease, in plant hypersensitive cell death induced by transcription factor OsNAC4.
    Plant Signal Behav, 2009. 4(8): p. 740-2
    [PMID:19820348]
  3. Xia N, et al.
    Characterization of a novel wheat NAC transcription factor gene involved in defense response against stripe rust pathogen infection and abiotic stresses.
    Mol. Biol. Rep., 2010. 37(8): p. 3703-12
    [PMID:20213512]
  4. Takasaki H, et al.
    The abiotic stress-responsive NAC-type transcription factor OsNAC5 regulates stress-inducible genes and stress tolerance in rice.
    Mol. Genet. Genomics, 2010. 284(3): p. 173-83
    [PMID:20632034]
  5. Nakayama A, et al.
    Genome-wide identification of WRKY45-regulated genes that mediate benzothiadiazole-induced defense responses in rice.
    BMC Plant Biol., 2013. 13: p. 150
    [PMID:24093634]
  6. Ootsubo Y,Hibino T,Wakazono T,Mukai Y,Che FS
    IREN, a novel EF-hand motif-containing nuclease, functions in the degradation of nuclear DNA during the hypersensitive response cell death in rice.
    Biosci. Biotechnol. Biochem., 2016. 80(4): p. 748-60
    [PMID:26766411]