PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | PEQU_15691 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
|
||||||||
Family | NAC | ||||||||
Protein Properties | Length: 314aa MW: 35561.3 Da PI: 6.9548 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 153.4 | 1e-47 | 11 | 137 | 3 | 128 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..kgel 99 pGfrFhPt+eel+ +yL++ ++gkkl++ ++i ++++y ++PwdLp+ +k +e+ewyfF++rd+++a+g r+nr+t++g+Wkatg+d+++ s+ ++l PEQU_15691 11 PGFRFHPTEEELLEFYLRRATAGKKLNF-DIIGTLNLYLYDPWDLPALAKMGEREWYFFVPRDRRQANGGRPNRTTERGFWKATGSDRPIRSAanPRRL 108 9*************************99.99***************8888899**************************************98766778 PP NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128 +glkktLv+y+grap+g+ktdWvm+eyrl PEQU_15691 109 IGLKKTLVYYRGRAPHGNKTDWVMNEYRL 137 ***************************98 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 54.381 | 9 | 163 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 2.09E-54 | 10 | 163 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.1E-24 | 11 | 137 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0009965 | Biological Process | leaf morphogenesis | ||||
GO:0010200 | Biological Process | response to chitin | ||||
GO:0045792 | Biological Process | negative regulation of cell size | ||||
GO:0048281 | Biological Process | inflorescence morphogenesis | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 314 aa Download sequence Send to blast |
MERSGSELDL PGFRFHPTEE ELLEFYLRRA TAGKKLNFDI IGTLNLYLYD PWDLPALAKM 60 GEREWYFFVP RDRRQANGGR PNRTTERGFW KATGSDRPIR SAANPRRLIG LKKTLVYYRG 120 RAPHGNKTDW VMNEYRLPDV LPTSFSVPQP PKEDIVLCKI YRKATSLKEL EQRAALEESR 180 TSASATSADQ DNMHKFSYDN NEVIMEMKAE FDVPPVEFNK EAAEVSSAAN IPTTVPLLEP 240 SAAVECPPVT QEPTASRPPP SPAAKVPSGR QLPILPAIQV PNHSFDLVQD SFLSQLRSPW 300 LDQWSPLYAS LLNF |
3D Structure ? help Back to Top | ||||||
---|---|---|---|---|---|---|
PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 5e-49 | 6 | 163 | 11 | 168 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Description | |||||
UniProt | Transcription activator that binds sequence-specific DNA motifs. Involved in stress response. Plays a positive role in drought and salt stress tolerance through the modulation of abscisic acid-mediated signaling. {ECO:0000269|PubMed:26834774}. |
Regulation -- Description ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Description | |||||
UniProt | INDUCTION: Induced by drought stress, salt stress and abscisic acid (ABA). {ECO:0000269|PubMed:26834774}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_020572425.1 | 0.0 | protein FEZ-like | ||||
Swissprot | Q10S65 | 3e-98 | NAC22_ORYSJ; NAC domain-containing protein 22 | ||||
TrEMBL | A0A2I0V748 | 0.0 | A0A2I0V748_9ASPA; NAC domain-containing protein 94 | ||||
STRING | XP_008813634.1 | 1e-115 | (Phoenix dactylifera) |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP1770 | 38 | 105 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G17040.1 | 2e-81 | NAC domain containing protein 36 |
Publications ? help Back to Top | |||
---|---|---|---|
|