PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PEQU_14924

Organism

Phalaenopsis equestris

Taxonomic ID

78828

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis

Family

NAC

Protein Properties

Length: 309aa MW: 35552 Da PI: 6.2378

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PEQU_14924	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	147.7	5.9e-46	10	174	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk....................................kvkaeekewyfFsk 63 lppGfrF P+deelv++yL kv++kk++ ++ evd++ ePwdLp+ ++k + +ewyfFs PEQU_14924 10 LPPGFRFYPSDEELVCHYLYMKVANKKTSQ-GTMVEVDLHIKEPWDLPAtciipfnntdcfntgplvscgakisndlnlhsytsqMAKLSPNEWYFFSF 107 79***********************888.88***********669*******************999999877644444777*** PP NAM 64 rdkkyatgkrknratksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrle 129 rd+kyatg+r+nratk+gyWkatgkd+ + + ++ +g++ktLv+y grap+g kt+Wvmhe+rle PEQU_14924 108 RDRKYATGSRANRATKTGYWKATGKDRIIRNPrRNVMMGMRKTLVYYLGRAPNGIKTNWVMHEFRLE 174 *************************998566779************************985 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF101941	3.53E-16	8	68	IPR003441	NAC domain
PROSITE profile	PS51005	52.167	10	192	IPR003441	NAC domain
Pfam	PF02365	3.3E-26	11	173	IPR003441	NAC domain
SuperFamily	SSF101941	9.29E-38	94	192	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 309 aa Download sequence Send to blast
MGLREVGSAL PPGFRFYPSD EELVCHYLYM KVANKKTSQG TMVEVDLHIK EPWDLPATCI 60 IPFNNTDCFN TGPLVSCGAK ISNDLNLHSY TSQMAKLSPN EWYFFSFRDR KYATGSRANR 120 ATKTGYWKAT GKDRIIRNPR RNVMMGMRKT LVYYLGRAPN GIKTNWVMHE FRLETPHSQP 180 KEDWVLCRVF HKRKEERDTE TTTCHTVISS SDLWNQFPPI VIDQPPPYYE ENNGCSLSTV 240 TTYQEEDNNL NCIHNPSLTQ FEFFNDFTFD QMEEGPKNGN IGQYELVWDM GLDHGGYDTV 300 NLEGVGFSG

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
1ut4_A	4e-43	1	193	4	166	NO APICAL MERISTEM PROTEIN
1ut4_B	4e-43	1	193	4	166	NO APICAL MERISTEM PROTEIN
1ut7_A	4e-43	1	193	4	166	NO APICAL MERISTEM PROTEIN
1ut7_B	4e-43	1	193	4	166	NO APICAL MERISTEM PROTEIN
3swm_A	4e-43	1	193	7	169	NAC domain-containing protein 19
3swm_B	4e-43	1	193	7	169	NAC domain-containing protein 19
3swm_C	4e-43	1	193	7	169	NAC domain-containing protein 19
3swm_D	4e-43	1	193	7	169	NAC domain-containing protein 19
3swp_A	4e-43	1	193	7	169	NAC domain-containing protein 19
3swp_B	4e-43	1	193	7	169	NAC domain-containing protein 19
3swp_C	4e-43	1	193	7	169	NAC domain-containing protein 19
3swp_D	4e-43	1	193	7	169	NAC domain-containing protein 19
4dul_A	4e-43	1	193	4	166	NAC domain-containing protein 19
4dul_B	4e-43	1	193	4	166	NAC domain-containing protein 19
Search in ModeBase

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020584901.1	0.0	NAC domain-containing protein 21/22-like
TrEMBL	A0A2I0VGT4	1e-155	A0A2I0VGT4_9ASPA; NAC domain-containing protein 21/22
STRING	GSMUA_Achr8P18980_001	2e-88	(Musa acuminata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP697	38	166

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G28530.1	1e-67	NAC domain containing protein 74