PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_14676
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family GATA
Protein Properties Length: 421aa    MW: 47489.4 Da    PI: 7.1394
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_14676genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA51.31.6e-16741135
        GATA  1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35
                C++Cg+t+TplWR+gp  ++ LCnaCG ++r kg+
  PEQU_14676  7 CRHCGVTSTPLWRNGPPDKPVLCNACGSRWRTKGS 41
                ****************55555***********997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM004012.2E-9153IPR000679Zinc finger, GATA-type
SuperFamilySSF577166.18E-11445No hitNo description
CDDcd002021.51E-16655No hitNo description
Gene3DG3DSA:3.30.50.102.3E-12741IPR013088Zinc finger, NHR/GATA-type
PROSITE profilePS5011411.345740IPR000679Zinc finger, GATA-type
PfamPF003202.4E-14741IPR000679Zinc finger, GATA-type
PfamPF139194.1E-7290372IPR028020ASX homology domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0008270Molecular Functionzinc ion binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 421 aa     Download sequence    Send to blast
MGKHGPCRHC GVTSTPLWRN GPPDKPVLCN ACGSRWRTKG SLANYTPLHA REKNEWEEPK  60
FAKMKSISLK NKETKLLKRK KMCGIVETEY EMRFSELDEN YARTFDGNAS NRSSSGSAIS  120
YSESCAHFGV ADGSDWTASA QSNVWDSSIV PVPSKKRSVI HPKPSPVEKL TKDLYSIWHE  180
QQSSNLSGSS EEDLLVEGDI PMGSVEIGHG GVLLRYPSCK VIDEESEASS LPVDNKLSSE  240
AYSRSSSFPV NSESKRTHFS DAGVDKNKKS TFQMSHEHAK REGVSPQNFS MVEDRDSPLR  300
FVDLKDVVSL EVFMEHLTND EQQRLMKYLP SIDTAKSWES LRNLFTSSLF MESLSYFQQL  360
LQDGVFDLSF GQMSVEECRN LKFVLLNSLK SRWVDHHGTL KVSNSLLEKF CCSKSLKENF  420
Y
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020586192.10.0GATA transcription factor 26-like isoform X1
TrEMBLA0A2I0X1290.0A0A2I0X129_9ASPA; GATA transcription factor 26
STRINGGSMUA_Achr4P17880_0011e-154(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP44243464
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17570.31e-87GATA transcription factor 26