PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_14261
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family WRKY
Protein Properties Length: 424aa    MW: 47937.3 Da    PI: 8.025
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_14261genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY919.3e-29174231260
                 --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 
                 +DgynWrKYGqK+vkg  +pr+YYrCt++ C+vkk ve+s+ d+++ ei+Y+geHnh+k
  PEQU_14261 174 SDGYNWRKYGQKHVKGIGYPRAYYRCTHPCCSVKKMVEKSK-DGEISEIVYRGEHNHPK 231
                 7***************************************9.***************85 PP
2WRKY94.48e-30368424258
                 --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnh 58 
                 dDgy+WrKYGqK+vkg+ fpr+YYrCt ++C+++k ver+++dp  +++tYeg+H+h
  PEQU_14261 368 DDGYHWRKYGQKVVKGNSFPRNYYRCTNQNCRARKYVERASDDPASFITTYEGDHKH 424
                 8*******************************************************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.804.3E-25163232IPR003657WRKY domain
SuperFamilySSF1182901.01E-22173232IPR003657WRKY domain
SMARTSM007741.1E-29173231IPR003657WRKY domain
PROSITE profilePS5081122.435174232IPR003657WRKY domain
PfamPF031061.4E-22175230IPR003657WRKY domain
Gene3DG3DSA:2.20.25.805.9E-29358424IPR003657WRKY domain
SuperFamilySSF1182901.02E-25365424IPR003657WRKY domain
SMARTSM007748.6E-32367424IPR003657WRKY domain
PfamPF031066.1E-25368424IPR003657WRKY domain
PROSITE profilePS5081129.184368424IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 424 aa     Download sequence    Send to blast
MNKNNTYRAS LRKSTEQLAS SSNAPPIIIS ETAVPIKPKA VRLKPSANHT SDIAFRCDVS  60
VQAASLTLDE ESVGIGNEKS ESIVLYRPIA QPFPSSALLK KFVSSCFVYN HEDYEEHKYT  120
LQDAHFQSPQ AHQVSCGQPI MNLHQSLTPF CAYDSKKTKV KSQQTTNNGD QNSSDGYNWR  180
KYGQKHVKGI GYPRAYYRCT HPCCSVKKMV EKSKDGEISE IVYRGEHNHP KPQKIKQSSA  240
LGLREQEAVI DGNGRNFKSD LLVNDSHLED NFFENKTESC GLEGILDDSI TWKTMYSDDS  300
YLVYPTVSPG FGADCRGEED SEFAAMDGFE KKSPERKHDD NTKEYSMKPQ KTSIPKVVAS  360
INCNHPSDDG YHWRKYGQKV VKGNSFPRNY YRCTNQNCRA RKYVERASDD PASFITTYEG  420
DHKH
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A6e-221754241877Probable WRKY transcription factor 4
2lex_A6e-221754241877Probable WRKY transcription factor 4
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020579578.10.0probable WRKY transcription factor 3 isoform X1
TrEMBLA0A2I0VVL91e-178A0A2I0VVL9_9ASPA; WRKY transcription factor 44
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP1847669
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37260.23e-56WRKY family protein