PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PEQU_14118 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
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Family | TALE | ||||||||
Protein Properties | Length: 172aa MW: 20363.3 Da PI: 11.1446 | ||||||||
Description | TALE family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 22.7 | 1.6e-07 | 125 | 157 | 22 | 54 |
SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 22 nrypsaeereeLAkklgLterqVkvWFqNrRak 54 ++ ps + LA+++gL+ +qV++WF N R + PEQU_14118 125 HPDPSDIGKHILARQTGLSRSQVSNWFINARVR 157 56666667778********************98 PP | |||||||
2 | BELL | 69.2 | 7.7e-23 | 1 | 61 | 12 | 72 |
BELL 12 LlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 L+ ++++V++rYk+y+ q++ ++ sFea ag ++a+pY +lA k +S+hFr Lkd i++qi PEQU_14118 1 LVLIMKQVKRRYKRYRWQMRSLVWSFEALAGGDAATPYLALACKVMSKHFRRLKDGITKQI 61 566889******************************************************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF07526 | 6.8E-19 | 1 | 58 | IPR006563 | POX domain |
SMART | SM00389 | 4.9E-4 | 102 | 165 | IPR001356 | Homeobox domain |
SuperFamily | SSF46689 | 2.14E-13 | 113 | 168 | IPR009057 | Homeodomain-like |
Gene3D | G3DSA:1.10.10.60 | 1.0E-21 | 115 | 168 | IPR009057 | Homeodomain-like |
CDD | cd00086 | 1.02E-6 | 115 | 161 | No hit | No description |
Pfam | PF05920 | 1.5E-14 | 118 | 157 | IPR008422 | Homeobox KN domain |
PROSITE profile | PS50071 | 9.912 | 120 | 161 | IPR001356 | Homeobox domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 172 aa Download sequence Send to blast |
LVLIMKQVKR RYKRYRWQMR SLVWSFEALA GGDAATPYLA LACKVMSKHF RRLKDGITKQ 60 IKRLMKVVRD KIHLVPCKLL GQCFQQSKGF QIKGFMMDQQ PWKTHRVLPE PSVSLRAWLF 120 AHFLHPDPSD IGKHILARQT GLSRSQVSNW FINARVRLWK PLIEEMYMEE IK |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor that establishes leaf shape by repressing growth in specific subdomains of the leaf. Negatively regulates knox homeobox gene KNAT1/BP expression. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020585688.1 | 1e-124 | LOW QUALITY PROTEIN: BEL1-like homeodomain protein 4 | ||||
Swissprot | Q9SW80 | 7e-54 | BLH2_ARATH; BEL1-like homeodomain protein 2 | ||||
TrEMBL | A0A2I0X817 | 3e-67 | A0A2I0X817_9ASPA; Homeobox protein BEL1 like | ||||
STRING | GLYMA11G02450.1 | 3e-63 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP7715 | 31 | 46 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G36870.2 | 3e-56 | BEL1-like homeodomain 2 |
Publications ? help Back to Top | |||
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