PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PEQU_13337 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
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Family | G2-like | ||||||||
Protein Properties | Length: 204aa MW: 23633.9 Da PI: 10.0394 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 34.3 | 5.4e-11 | 46 | 69 | 2 | 25 |
G2-like 2 prlrWtpeLHerFveaveqLGGse 25 prlrWt eLH++Fv+av++LGG+e PEQU_13337 46 PRLRWTAELHHSFVRAVARLGGQE 69 8*********************97 PP | |||||||
2 | G2-like | 46.7 | 7.2e-15 | 116 | 145 | 26 | 55 |
G2-like 26 kAtPktilelmkvkgLtlehvkSHLQkYRl 55 AtPk +l++m+v g++++hvkSHLQ+YR+ PEQU_13337 116 GATPKLVLQMMNVRGISIAHVKSHLQMYRS 145 59***************************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 9.9E-26 | 42 | 69 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 4.8E-10 | 116 | 147 | IPR006447 | Myb domain, plants |
Gene3D | G3DSA:1.10.10.60 | 9.9E-26 | 117 | 146 | IPR009057 | Homeodomain-like |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 204 aa Download sequence Send to blast |
KKMKTEKTEG ESSDNNNTSN NNGGNECGDE RPRSGSVRQY VKSKLPRLRW TAELHHSFVR 60 AVARLGGQES KFFLKFLNCC KTFFCCKSFG TFVIFLIYLY VIGANGLNFC LIFQAGATPK 120 LVLQMMNVRG ISIAHVKSHL QMYRSKKLDD FGQEKFIFSS GYSSWDDNLR RESFHDMFFQ 180 RGGSYQPFNH ETQKHLEFRN TTFR |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020576768.1 | 2e-90 | uncharacterized protein LOC110022262 | ||||
TrEMBL | A0A2I0VHV8 | 2e-42 | A0A2I0VHV8_9ASPA; Myb family transcription factor |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP4408 | 36 | 71 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G38300.1 | 4e-27 | G2-like family protein |