PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_13333
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family Trihelix
Protein Properties Length: 308aa    MW: 34484.2 Da    PI: 9.7843
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_13333genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix46.97.3e-1518106186
    trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                 +W++ e+  L++a  ++  +l+rg+l++++W+ev++++     + r   r+ +qCk++++ l+k+yk +k+   +++++s+  +p++++l+
  PEQU_13333  18 CWSEGETSILVDAWGDRFLDLNRGNLRQKQWQEVADAVngrwgAGRRPPRTDVQCKNRIDTLKKKYKIEKAKIYDGACGSQ--WPFYSRLD 106
                 7**************************************9998778889***************************99887..*****997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138371.6E-2516107No hitNo description
Gene3DG3DSA:1.10.10.604.6E-41982IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 308 aa     Download sequence    Send to blast
MEALSRPPNP AVPYREDCWS EGETSILVDA WGDRFLDLNR GNLRQKQWQE VADAVNGRWG  60
AGRRPPRTDV QCKNRIDTLK KKYKIEKAKI YDGACGSQWP FYSRLDMLIG SSVPVKKPPM  120
SSSSPPLALP LPSYRKGLPL PAAAAVRAVE SFSKEKRPAA VGLSADDSVF GRNGGSLESG  180
SSSKLSGSST ERSRSNRDRS TIGLGEKRKG QEDGGIGELA RVMEWFADVY EKVEVEKQRQ  240
MIDLEKERME FIKGLEFQRM QMFVDTQVQV AKIKRARRSD SGEQASSLPL PFSFCPLRSI  300
CKFYCDFS
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00413DAPTransfer from AT3G58630Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020705771.11e-149trihelix transcription factor ASIL2
TrEMBLA0A2I0WAG71e-149A0A2I0WAG7_9ASPA; Uncharacterized protein
STRINGGSMUA_Achr5P09160_0011e-101(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP20653279
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58630.12e-30sequence-specific DNA binding transcription factors