PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_13141
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family TALE
Protein Properties Length: 353aa    MW: 39397.7 Da    PI: 8.4655
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_13141genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox28.62.4e-091571941954
                 HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
    Homeobox  19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                 Fe   ++yp+  +++ LAk+ gLt +qV++WF N R +
  PEQU_13141 157 FEHflHPYPTDVDKQMLAKEAGLTRNQVSNWFINARVR 194
                 554459******************************88 PP
2BELL74.51.7e-2444981872
        BELL 18 eVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72
                +V++rY+ y++q+q vi sFe+vagl +a+pY+slAlka+ +hFrcLkda+++q+
  PEQU_13141 44 NVCRRYRIYYQQVQNVITSFEMVAGLSTAAPYVSLALKAMFKHFRCLKDAMSKQL 98
                69***************************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM005741.1E-4296IPR006563POX domain
PfamPF075267.5E-204494IPR006563POX domain
PROSITE profilePS5007112.147135198IPR001356Homeobox domain
SMARTSM003891.8E-9138202IPR001356Homeobox domain
CDDcd000862.14E-12138199No hitNo description
SuperFamilySSF466891.8E-16139205IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.603.7E-27141202IPR009057Homeodomain-like
PfamPF059204.4E-18155194IPR008422Homeobox KN domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 353 aa     Download sequence    Send to blast
MAHFPTGTGL LQIQPPQGSF SLTLSPAAAL LPLGPFTGYS AVLNVCRRYR IYYQQVQNVI  60
TSFEMVAGLS TAAPYVSLAL KAMFKHFRCL KDAMSKQLNL SHRDSAKQGI GRTEISTIGT  120
CLRQDGNNLD SYRQPHTWRP QRGLPERAVA VLRAWLFEHF LHPYPTDVDK QMLAKEAGLT  180
RNQVSNWFIN ARVRLWKPMV EEIHNLEIRQ LQKTLDPNDK TLMADQKEAS KPSSSIATAA  240
SNQPPQNNCI QRNQNPYSRS LNNELSYIEE PCNYTYNDFA CRDIGRNAGS VSLTLGLHQD  300
GGGIHLPEPL PLNVARRFGL DDCNDAYVVG GFEGQERGFG KDVGGHLLHD FVG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3k2a_A4e-16144202563Homeobox protein Meis2
3k2a_B4e-16144202563Homeobox protein Meis2
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020590224.10.0LOW QUALITY PROTEIN: BEL1-like homeodomain protein 9
TrEMBLA0A2I0WZ540.0A0A2I0WZ54_9ASPA; BEL1-like homeodomain protein 9
STRINGGSMUA_Achr7P14960_0011e-114(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP25283881
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G02030.11e-68TALE family protein