PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_12563
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family GeBP
Protein Properties Length: 397aa    MW: 44534.3 Da    PI: 5.7722
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_12563genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57386.82.9e-27198295297
      DUF573   2 lfqrlwseeDeivlLqGlidfkaktgkspsd..didafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97 
                 +f+r+ws eDe++lLqG++++k++  + p++  + + + + vk+s+s+ vs +q+++K+rrLKk++k+  +++   k  +fs +h+  +f+lsk+iW+
  PEQU_12563 198 RFRRIWSYEDELALLQGILEYKEQYHAIPYAhvHAESLLKSVKDSLSISVSANQITDKVRRLKKRYKNTAARRILAKRSKFSDAHNAAVFDLSKMIWD 295
                 79*************************8887457789***********************************99999********************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045044.0E-24199295IPR007592Protein of unknown function DUF573
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005730Cellular Componentnucleolus
GO:0005829Cellular Componentcytosol
GO:0009507Cellular Componentchloroplast
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 397 aa     Download sequence    Send to blast
MVESSESEEK ESTDEESSED LGTAARPPNP PTQLRDSQTT NDGKQEVSNN SSSSESGSGD  60
GEEDGKEFNS RAESKQLRPR SPPQPARNSV NPIADSPLKP PNSSKSVAGE ENEDEGSESE  120
EEESTADNES SDSQNMDDDK QAPDPFLDPV SKKPLVSSTQ PVEKEPNSGK QSAASHARIS  180
KKKRKASVVG PGGQEKERFR RIWSYEDELA LLQGILEYKE QYHAIPYAHV HAESLLKSVK  240
DSLSISVSAN QITDKVRRLK KRYKNTAARR ILAKRSKFSD AHNAAVFDLS KMIWDSLKEE  300
SFFRENKVKL EKREESYNKK KRDSKHFAGE YPSLYWFLRS DHGNNALVLQ NHIPVATIDM  360
LEEKCKKLEM IDMQLNMQKI EFLSSAVKLI KDALAKC
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020582800.10.0STOREKEEPER protein-like
TrEMBLA0A2I0VCF41e-114A0A2I0VCF4_9ASPA; Mediator-associated protein 1
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP26713587
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61730.16e-18DNA-binding storekeeper protein-related transcriptional regulator